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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:30.3RPKM
FANTOM5:132.8Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody CAB002490

 

Glial cells

Medium  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

30.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 30.3
Samples: 117

Max RPKM: 82.2
Min RPKM: 8.2
Std RPKM: 13.1
Median RPKM: 28.2
GTEX-12WSA-0011-R5b-SM-5GU5I 82.2
GTEX-13NYB-0011-R5a-SM-5MR45 60.8
GTEX-13FLV-0011-R5a-SM-5LZWT 57.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 56.1
GTEX-QMR6-0011-R5A-SM-32PKT 54.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 54.5
GTEX-13O3O-0011-R5b-SM-5KM44 53.9
GTEX-11NV4-0011-R5a-SM-5NQ88 52.9
GTEX-N7MS-0011-R5a-SM-2HMK8 51.7
GTEX-X4XX-0011-R5A-SM-46MWN 51.6
GTEX-12WSB-0011-R5b-SM-5GU67 50.3
GTEX-WL46-0011-R5A-SM-3LK6V 49.9
GTEX-132Q8-0011-R5a-SM-5IJDM 49.5
GTEX-13OVH-0011-R5b-SM-5KM4L 47.6
GTEX-WWYW-0011-R5A-SM-3NB3E 46.5
GTEX-13JVG-0011-R5a-SM-5MR4O 46.4
GTEX-WZTO-0011-R5B-SM-3NMC5 45.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 44.6
GTEX-PVOW-0011-R5A-SM-32PL7 44.6
GTEX-RVPV-0011-R5A-SM-2TF69 44.6
GTEX-Z93S-0011-R5b-SM-4RGNI 44.3
GTEX-12WSF-0011-R5a-SM-5HL8K 44.1
GTEX-X585-0011-R5A-SM-46MVI 44.0
GTEX-XOTO-0011-R5A-SM-4B657 42.1
GTEX-13FXS-0011-R5b-SM-5LZYE 41.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 40.0
GTEX-13OW7-0011-R5b-SM-5O9DM 39.8
GTEX-WHSE-0011-R5A-SM-3P5ZO 39.4
GTEX-R55E-0011-R5A-SM-2TC5N 39.3
GTEX-13112-0011-R5b-SM-5DUV8 38.9
GTEX-11H98-0011-R5b-SM-57WCF 38.7
GTEX-ZUA1-0011-R5b-SM-51MTG 38.4
GTEX-13X6I-0011-R5a-SM-5PNWW 38.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 38.0
GTEX-14BIN-0011-R5b-SM-5SI78 37.1
GTEX-13X6K-0011-R5b-SM-5PNUE 35.6
GTEX-YFC4-0011-R5a-SM-4RGLR 34.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 34.0
GTEX-OHPN-0011-R5A-SM-2I5FF 33.9
GTEX-ZVT3-0011-R5a-SM-51MSI 33.9
GTEX-144GL-0011-R5b-SM-5PNUJ 33.2
GTEX-WVLH-0011-R5A-SM-3MJFW 32.8
GTEX-13OW6-0011-R5a-SM-5O9BK 32.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 31.7
GTEX-144GO-0011-R5a-SM-5PNUR 31.3
GTEX-13OVL-0011-R5b-SM-5L3FU 31.2
GTEX-145LS-0011-R5a-SM-5SI65 30.2
GTEX-11WQC-0011-R5a-SM-5BC74 29.8
GTEX-13FLW-0011-R5a-SM-5LZX6 29.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 29.3
GTEX-13FHP-0011-R5b-SM-5LZY2 29.1
GTEX-ZXG5-0011-R5b-SM-57WBN 29.1
GTEX-XMD1-0011-R5A-SM-4AT47 29.0
GTEX-139TS-0011-R5b-SM-5J2MZ 28.8
GTEX-12ZZX-0011-R5a-SM-5HL89 28.6
GTEX-1399T-0011-R5b-SM-5IJDK 28.5
GTEX-13NYS-0011-R5a-SM-5MR4D 28.5
GTEX-1445S-0011-R5a-SM-5PNUS 28.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 28.2
GTEX-NPJ7-0011-R5a-SM-33HBK 27.3
GTEX-11GSP-0011-R5a-SM-57WBE 27.2
GTEX-14ABY-0011-R5b-SM-5SI7B 26.9
GTEX-13CF2-0011-R5a-SM-5LZWS 26.5
GTEX-X261-0011-R5A-SM-3NMB4 26.4
GTEX-S7SE-0011-R5A-SM-2XCDA 25.6
GTEX-QVJO-0011-R5A-SM-2S1QM 25.3
GTEX-13S7M-0011-R5b-SM-5P9HS 25.0
GTEX-131YS-0011-R5b-SM-5K7YB 24.9
GTEX-13OW5-0011-R5b-SM-5L3FR 24.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 24.5
GTEX-NL4W-0011-R5a-SM-2I3GD 24.2
GTEX-T5JC-0011-R5A-SM-32PLK 24.1
GTEX-11UD1-0011-R5b-SM-5P9FP 23.7
GTEX-13SLX-0011-R5a-SM-5O9BV 23.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 23.5
GTEX-145MH-0011-R5a-SM-5P9JT 23.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 23.1
GTEX-12WSD-0011-R5b-SM-5CVNG 23.0
GTEX-RVPU-0011-R5A-SM-2XCAD 23.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 22.9
GTEX-ZE7O-0011-R5a-SM-57WBO 22.8
GTEX-13X6J-0011-R5b-SM-5PNWT 22.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 22.5
GTEX-139TT-0011-R5b-SM-5K7W8 22.1
GTEX-13VXU-0011-R5a-SM-5O9D7 21.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 21.7
GTEX-P44H-0011-R5A-SM-2XCEX 20.5
GTEX-1313W-0011-R5b-SM-5L3EP 20.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 20.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 20.0
GTEX-N7MT-0011-R5a-SM-2I3G6 19.6
GTEX-12WSC-0011-R5b-SM-5CVNS 19.3
GTEX-13JUV-0011-R5a-SM-5LZY5 18.9
GTEX-13CZV-0011-R5a-SM-5K7XA 18.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 18.5
GTEX-ZV68-0011-R5a-SM-4YCDW 18.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 17.9
GTEX-11OF3-0011-R5a-SM-57WB4 17.8
GTEX-1477Z-0011-R5b-SM-5PNUO 17.8
GTEX-NL3H-0011-R5a-SM-2I3GB 17.8
GTEX-YJ89-0011-R5a-SM-4V6GM 17.7
GTEX-RU72-0011-R5A-SM-2TF6U 17.3
GTEX-12WSH-0011-R5b-SM-5P9F3 16.5
GTEX-14BIM-0011-R5b-SM-5S2RM 16.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 16.4
GTEX-13G51-0011-R5a-SM-5L3EB 16.2
GTEX-TSE9-0011-R5A-SM-3DB7J 15.7
GTEX-S7PM-0011-R5A-SM-3NM8G 15.6
GTEX-139T8-0011-R5b-SM-5J1MO 14.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 14.3
GTEX-UTHO-0011-R5A-SM-3GIJD 13.6
GTEX-T6MN-0011-R5A-SM-32QPD 13.2
GTEX-13NZA-0011-R5b-SM-5KM4K 12.7
GTEX-13CIG-0011-R5b-SM-5L3F2 11.8
GTEX-OXRN-0011-R5A-SM-2I5EF 11.5
GTEX-T2IS-0011-R5A-SM-32QP4 10.2
GTEX-145MG-0011-R5b-SM-5S2VU 8.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

132.8

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 132.8
FF:10379-105H1 89 years, female 140.6
FF:10164-103B2 76 years, female 125.1

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