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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:218.2TPM
GTEx:56.0RPKM
FANTOM5:201.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody CAB002490

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

218.2

overview Male, age 65
Sample 1
TPM: 138.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 216.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 281.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 236.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

56.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 56.0
Samples: 88

Max RPKM: 114.5
Min RPKM: 12.3
Std RPKM: 17.9
Median RPKM: 54.8
GTEX-1192X-2526-SM-59868 114.5
GTEX-12WSK-1526-SM-5CVNO 103.7
GTEX-Y3IK-1726-SM-4YCCR 101.1
GTEX-139YR-2226-SM-5IFFW 90.5
GTEX-13O21-1026-SM-5IJDU 84.3
GTEX-ZQUD-0926-SM-57WE3 83.9
GTEX-ZF2S-1726-SM-57WFT 82.9
GTEX-13OVI-1926-SM-5IJCG 79.9
GTEX-WEY5-1526-SM-4LMJF 78.6
GTEX-117YX-0326-SM-5GICL 77.9
GTEX-145LT-1026-SM-5LU9O 77.7
GTEX-13RTK-0826-SM-5Q5C6 77.2
GTEX-Y5LM-1626-SM-4VDTB 76.6
GTEX-13111-1426-SM-5DUW3 72.8
GTEX-XMK1-1826-SM-4B66F 72.1
GTEX-XGQ4-1326-SM-4GIDU 71.8
GTEX-131XF-1326-SM-5GCMQ 69.3
GTEX-133LE-1426-SM-5IFH1 69.0
GTEX-ZYFG-2026-SM-5E43Y 68.6
GTEX-ZLV1-1126-SM-4WWBW 67.7
GTEX-ZXES-1526-SM-5NQ95 66.9
GTEX-13QBU-1926-SM-5IJEW 66.5
GTEX-13FTW-2026-SM-5IJE2 65.9
GTEX-XUZC-1426-SM-4BRV3 65.3
GTEX-11P7K-1626-SM-5GU63 64.9
GTEX-13113-1226-SM-5EGHT 64.6
GTEX-ZYWO-1526-SM-5SIAL 64.4
GTEX-139T6-1026-SM-5IJGC 64.0
GTEX-ZP4G-1626-SM-57WGD 63.7
GTEX-WFG7-1726-SM-4LVME 62.7
GTEX-YB5E-1526-SM-5IFIE 62.5
GTEX-WFG8-1626-SM-4LVMB 62.0
GTEX-ZVT2-2126-SM-5NQ93 61.2
GTEX-11EQ9-1326-SM-5985X 61.1
GTEX-ZQG8-2526-SM-57WEQ 60.3
GTEX-11DXX-1626-SM-5H11H 59.8
GTEX-111CU-1326-SM-5NQ8L 59.1
GTEX-Y114-1426-SM-4TT6W 59.0
GTEX-13PL7-2626-SM-5IFH4 57.7
GTEX-ZTX8-0526-SM-59HLD 57.0
GTEX-145ME-0926-SM-5O9AR 56.6
GTEX-ZA64-1226-SM-5HL7B 56.0
GTEX-131XG-1726-SM-5LZUR 55.8
GTEX-14DAR-1426-SM-5RQIR 55.3
GTEX-1122O-1326-SM-5H11F 54.2
GTEX-ZPIC-2326-SM-57WDW 53.3
GTEX-XAJ8-0526-SM-47JYK 53.2
GTEX-WQUQ-2426-SM-4MVNW 53.2
GTEX-1399R-2026-SM-5K7WN 52.2
GTEX-Y9LG-1626-SM-5IFHM 51.9
GTEX-XBED-1426-SM-4AT4G 51.8
GTEX-11DXZ-1326-SM-5H11X 51.2
GTEX-YEC4-1726-SM-4W21E 50.0
GTEX-ZZ64-0526-SM-5GZXM 48.8
GTEX-11I78-1126-SM-5A5K5 47.6
GTEX-13D11-0726-SM-5LZZB 46.1
GTEX-ZEX8-1826-SM-57WBH 46.1
GTEX-ZTSS-0926-SM-59865 46.1
GTEX-148VJ-2226-SM-5NQ9M 46.0
GTEX-111YS-1426-SM-5GID8 45.0
GTEX-WRHK-1026-SM-4MVOD 44.5
GTEX-ZTPG-2626-SM-57WFX 43.7
GTEX-1399U-2126-SM-5IFEZ 43.5
GTEX-ZPCL-1726-SM-57WEO 43.5
GTEX-12BJ1-1926-SM-5HL9Z 43.3
GTEX-13O61-1326-SM-5KM31 42.5
GTEX-Z9EW-0926-SM-5CVMM 41.8
GTEX-14E6E-1626-SM-5RQI7 41.6
GTEX-ZVZP-1826-SM-5GZXB 41.1
GTEX-11XUK-1426-SM-5EQMG 39.3
GTEX-11NSD-1726-SM-5N9C3 39.2
GTEX-YF7O-1826-SM-5IFIU 38.9
GTEX-ZLFU-1526-SM-4WWBT 38.5
GTEX-X15G-1426-SM-4PQZK 37.9
GTEX-ZVP2-1726-SM-5GU5P 37.8
GTEX-X5EB-1626-SM-4E3IV 37.0
GTEX-XXEK-1026-SM-4BRUW 36.8
GTEX-VJYA-0926-SM-4KL1N 36.1
GTEX-11P82-0826-SM-5P9GU 35.3
GTEX-ZC5H-2326-SM-4WAYT 35.1
GTEX-WH7G-1626-SM-4LVMY 34.5
GTEX-13CF3-1226-SM-5LZXN 34.2
GTEX-1399S-2026-SM-5KM4B 33.9
GTEX-WFJO-0926-SM-4LVM2 33.6
GTEX-11VI4-1626-SM-5EQKO 31.9
GTEX-VUSG-1726-SM-4KKZL 30.3
GTEX-13FH7-1226-SM-5IJFK 30.1
GTEX-UPK5-2026-SM-4JBIM 12.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

201.2

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 201.2
FF:10024-101D6 15,40,85 years, mixed 201.2

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