We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
NISCH
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:21.4RPKM
FANTOM5:76.4Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA023189

 

Glial cells

Low  

Neuronal cells

Low  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

21.4

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 21.4
Samples: 94

Max RPKM: 48.8
Min RPKM: 7.7
Std RPKM: 9.5
Median RPKM: 20.9
GTEX-T5JC-0011-R1A-SM-32PM6 48.8
GTEX-131XH-0011-R1a-SM-5DUWA 46.0
GTEX-WWYW-0011-R1A-SM-3TW8G 44.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 40.9
GTEX-X585-0011-R1B-SM-46MVE 40.4
GTEX-RNOR-0011-R1A-SM-5SI8F 39.6
GTEX-WL46-0011-R1A-SM-3LK6M 39.1
GTEX-R55E-0011-R1A-SM-2TC6N 38.2
GTEX-13OW6-0011-R1a-SM-5L3HQ 36.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 35.3
GTEX-13FLW-0011-R1b-SM-5LZX2 34.2
GTEX-145MH-0011-R1b-SM-5PNWY 33.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 33.0
GTEX-13JUV-0011-R1a-SM-5LZY4 31.8
GTEX-X4XX-0011-R1B-SM-3P622 31.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 29.4
GTEX-11ONC-0011-R1a-SM-57WD4 29.2
GTEX-WVLH-0011-R1A-SM-4MVOK 28.9
GTEX-13FXS-0011-R1a-SM-5K7U6 27.9
GTEX-XOTO-0011-R1B-SM-4B65C 27.7
GTEX-TSE9-0011-R1A-SM-3DB7E 26.8
GTEX-1313W-0011-R1b-SM-5EQ4A 26.4
GTEX-S7SE-0011-R1A-SM-2XCDE 26.2
GTEX-13OW7-0011-R1b-SM-5L3HF 26.0
GTEX-N7MS-0011-R1a-SM-2HMJG 25.9
GTEX-PVOW-0011-R1A-SM-32PL6 25.6
GTEX-13G51-0011-R1a-SM-5LZYR 25.4
GTEX-13NYB-0011-R1b-SM-5KM4F 25.4
GTEX-QVJO-0011-R1A-SM-2S1QI 25.1
GTEX-13N2G-0011-R1b-SM-5MR3G 24.6
GTEX-139TT-0011-R1a-SM-5LZVD 24.4
GTEX-NPJ7-0011-R1a-SM-3GACT 24.3
GTEX-13O3O-0011-R1b-SM-5KM2K 24.3
GTEX-WZTO-0011-R1B-SM-3NMAR 24.1
GTEX-13X6I-0011-R1b-SM-5PNZC 24.0
GTEX-12WSE-0011-R1b-SM-5GU4V 23.8
GTEX-13PDP-0011-R1a-SM-5PNX5 23.7
GTEX-YFC4-0011-R1a-SM-4V6EH 23.4
GTEX-QDT8-0011-R1A-SM-32PKS 23.2
GTEX-T6MN-0011-R1A-SM-32QOY 23.2
GTEX-N7MT-0011-R1a-SM-5SI7S 22.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 22.7
GTEX-12WSD-0011-R1b-SM-5LZVY 22.7
GTEX-132Q8-0011-R1a-SM-5EGLK 22.2
GTEX-QVUS-0011-R1A-SM-3GAD2 21.2
GTEX-12WSM-0011-R1a-SM-5LZW6 20.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 20.9
GTEX-P44H-0011-R1A-SM-3NM8J 20.9
GTEX-14ASI-0011-R1b-SM-5S2TY 20.5
GTEX-13N1W-0011-R1b-SM-5MR4T 20.2
GTEX-13FHO-0011-R1b-SM-5KLZG 20.1
GTEX-13NYS-0011-R1b-SM-5MR55 19.9
GTEX-12WSF-0011-R1a-SM-5DUVI 19.3
GTEX-ZUA1-0011-R1a-SM-4YCE2 18.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 18.1
GTEX-13SLW-0011-R1a-SM-5S2W7 18.0
GTEX-1399T-0011-R1b-SM-5DUWN 16.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 16.3
GTEX-131YS-0011-R1a-SM-5DUXC 16.2
GTEX-13QJC-0011-R1b-SM-5S2UU 15.9
GTEX-13OW5-0011-R1b-SM-5L3GE 15.8
GTEX-145LS-0011-R1b-SM-5PNUP 15.6
GTEX-13S7M-0011-R1b-SM-5PNZE 15.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 15.3
GTEX-NL3H-0011-R1a-SM-48TDJ 15.3
GTEX-144GL-0011-R1a-SM-5PNZ5 15.2
GTEX-XMD1-0011-R1A-SM-4AT4C 15.1
GTEX-PWO3-0011-R1A-SM-2I5EW 14.5
GTEX-11GSO-0011-R1b-SM-57WD3 14.0
GTEX-12WSH-0011-R1a-SM-5GU5V 13.9
GTEX-UTHO-0011-R1A-SM-3GIJO 13.8
GTEX-13OVL-0011-R1a-SM-5L3H5 13.7
GTEX-139T8-0011-R1a-SM-5HL75 13.6
GTEX-13112-0011-R1b-SM-5HL7K 13.6
GTEX-QMR6-0011-R1A-SM-32PKW 13.2
GTEX-11UD1-0011-R1b-SM-5BC7D 13.1
GTEX-13OW8-0011-R1a-SM-5L3HI 12.8
GTEX-12WSB-0011-R1b-SM-5P9EY 12.4
GTEX-13JVG-0011-R1a-SM-5KM32 12.2
GTEX-ZF28-0011-R1a-SM-4WWD1 11.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 10.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 10.6
GTEX-144GO-0011-R1a-SM-5PNWO 10.4
GTEX-1212Z-0011-R1b-SM-5BC72 10.3
GTEX-NPJ8-0011-R1a-SM-33HCB 9.7
GTEX-13NZA-0011-R1b-SM-5LUAF 8.7
GTEX-11ZTS-0011-R1a-SM-5BC71 8.6
GTEX-145LU-0011-R1a-SM-5Q5CE 8.5
GTEX-13FHP-0011-R1b-SM-5K7XL 8.5
GTEX-13CF2-0011-R1a-SM-5LZY1 8.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 8.1
GTEX-YJ89-0011-R1a-SM-4RGLS 7.9
GTEX-13FTY-0011-R1a-SM-5LZXE 7.7
GTEX-ZE7O-0011-R1a-SM-57WDM 7.7
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

76.4

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 76.4
FF:10169-103B7 60 years, female 92.7
FF:10153-102I9 76 years, female 91.8
FF:10374-105G5 89 years, female 44.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.