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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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TSPAN9
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:29.5TPM
GTEx:20.8RPKM
FANTOM5:18.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA014002

 

Glandular cells

Low  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

29.5

overview Male, age 62
Sample 1
TPM: 28.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 32.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 38.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 33.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 32.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 39.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 33.0
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 23.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 16.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

20.8

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 20.8
Samples: 106

Max RPKM: 45.4
Min RPKM: 5.5
Std RPKM: 6.4
Median RPKM: 21.2
GTEX-132NY-2826-SM-5P9G2 45.4
GTEX-13FXS-2826-SM-5LZYC 34.5
GTEX-WZTO-0926-SM-4PQZ3 33.0
GTEX-12ZZZ-2026-SM-5LZWJ 32.6
GTEX-13N2G-1826-SM-5KM1I 32.2
GTEX-11OF3-1726-SM-5GU5Q 31.4
GTEX-11DYG-2526-SM-5N9BB 31.1
GTEX-11NSD-0826-SM-5986S 30.6
GTEX-T8EM-1826-SM-4DM7F 29.3
GTEX-UTHO-2726-SM-4JBH9 29.2
GTEX-WFG8-1826-SM-4LVM4 28.1
GTEX-XOTO-2826-SM-4B65I 27.9
GTEX-QEG4-2226-SM-4R1JM 27.8
GTEX-13G51-2326-SM-5LZXV 27.1
GTEX-QV44-1526-SM-4R1KI 27.1
GTEX-13O61-1726-SM-5KM46 26.9
GTEX-111FC-2026-SM-5GZYO 26.8
GTEX-1399R-0526-SM-5IJEF 26.1
GTEX-XQ3S-2526-SM-4BOOG 26.0
GTEX-ZPU1-2026-SM-57WFI 26.0
GTEX-RWSA-2026-SM-47JX8 25.9
GTEX-YJ8A-1126-SM-5IFJU 25.9
GTEX-139T6-1526-SM-5P9G6 25.8
GTEX-SJXC-2026-SM-4DM6N 24.8
GTEX-146FQ-1726-SM-5QGPX 24.7
GTEX-11ZUS-2126-SM-5N9E6 24.2
GTEX-14BMV-2326-SM-5RQJ4 24.2
GTEX-U4B1-1426-SM-4DXTX 24.2
GTEX-PLZ6-1126-SM-3P5ZR 24.1
GTEX-S33H-1826-SM-4AD65 23.9
GTEX-13FHO-2826-SM-5K7ZA 23.7
GTEX-SNMC-0926-SM-4DM5U 23.7
GTEX-13OW8-0426-SM-5J2NR 23.5
GTEX-117YW-1426-SM-5EGGO 23.3
GTEX-WOFM-0326-SM-4OOSL 23.2
GTEX-YF7O-1926-SM-4W1YQ 23.2
GTEX-11WQK-2726-SM-5EQMU 23.0
GTEX-U412-2026-SM-4DXSI 23.0
GTEX-1399T-1226-SM-5P9J5 22.9
GTEX-XMK1-1026-SM-4B65H 22.8
GTEX-14ABY-0726-SM-5Q5DF 22.7
GTEX-WFON-1626-SM-4LVMV 22.7
GTEX-QMRM-1426-SM-4R1K8 22.6
GTEX-QLQ7-1326-SM-4R1JY 22.5
GTEX-V1D1-1926-SM-4JBGX 22.3
GTEX-ZUA1-2826-SM-59HLE 22.3
GTEX-ZZ64-0926-SM-5E44L 22.3
GTEX-Q2AI-1126-SM-48U19 22.2
GTEX-WFG7-1826-SM-3GIL1 22.0
GTEX-XAJ8-0626-SM-47JY4 21.9
GTEX-Y8E4-2126-SM-5RQHO 21.9
GTEX-145LT-0626-SM-5O99E 21.5
GTEX-148VJ-1826-SM-5Q5DV 21.5
GTEX-X5EB-1826-SM-4E3K8 21.0
GTEX-111YS-1726-SM-5GIED 20.8
GTEX-ZTTD-2726-SM-57WFA 20.8
GTEX-11P82-1126-SM-5BC5K 20.6
GTEX-ZTX8-1026-SM-5EGHD 20.5
GTEX-11O72-2726-SM-5HL6K 20.4
GTEX-OOBJ-2026-SM-3NB1R 20.2
GTEX-11P7K-0626-SM-5985Z 20.0
GTEX-12C56-1326-SM-5FQSV 19.3
GTEX-WH7G-1726-SM-4LVKY 19.3
GTEX-S4Q7-1026-SM-4AD75 19.1
GTEX-11TT1-2026-SM-5EQM8 18.9
GTEX-QV31-1026-SM-4R1K3 18.8
GTEX-111CU-1526-SM-5N9FS 18.6
GTEX-11TUW-2126-SM-5GU7B 18.5
GTEX-REY6-2126-SM-48FD9 18.5
GTEX-13FTW-1226-SM-5LZZ1 18.4
GTEX-S95S-1026-SM-4B64M 18.4
GTEX-144GM-0826-SM-5O98R 18.1
GTEX-NFK9-2226-SM-3MJGP 17.6
GTEX-XGQ4-1826-SM-4AT6F 17.6
GTEX-OIZH-2026-SM-3NB1M 17.5
GTEX-RM2N-1126-SM-48FCY 17.3
GTEX-ZY6K-1526-SM-5GZXE 17.2
GTEX-V955-1826-SM-4JBIL 17.1
GTEX-ZLFU-1726-SM-4WWBU 16.5
GTEX-117YX-1526-SM-5H12T 16.2
GTEX-U3ZM-0926-SM-4DXSW 16.0
GTEX-132QS-1126-SM-5P9GC 15.7
GTEX-YB5E-1826-SM-5IFI4 15.6
GTEX-12BJ1-1226-SM-5LUAE 15.5
GTEX-XPVG-2026-SM-4B65E 15.0
GTEX-NPJ8-2426-SM-3MJHL 14.8
GTEX-ZDYS-1226-SM-5IJF3 14.8
GTEX-131XF-1926-SM-5DUW4 14.6
GTEX-13O21-1126-SM-5N9EV 14.6
GTEX-14E6E-1126-SM-5S2R4 13.9
GTEX-WK11-2626-SM-4OOSK 13.6
GTEX-13NYS-1026-SM-5KLZT 13.3
GTEX-145LV-1226-SM-5S2QH 13.3
GTEX-Y9LG-1826-SM-4VBQC 13.2
GTEX-VJYA-1226-SM-3GIJ6 13.1
GTEX-S3XE-1326-SM-4AD4H 12.9
GTEX-SNOS-1026-SM-4DM4Y 12.7
GTEX-ZT9W-1626-SM-4YCDQ 12.7
GTEX-11EQ9-1726-SM-5HL6U 12.6
GTEX-ZVP2-0826-SM-59HJ6 12.0
GTEX-OOBK-2025-SM-3LK5S 11.2
GTEX-U8XE-2526-SM-4E3IT 10.4
GTEX-13111-1326-SM-5GCNO 9.9
GTEX-13RTJ-2126-SM-5S2PZ 6.7
GTEX-14C5O-2826-SM-5RQI6 6.1
GTEX-12696-2226-SM-5EQ65 5.5
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

18.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 18.4
FF:10022-101D4 73,79,93 years, male 18.4

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