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Gene name

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In atlas

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Method

Validation

Method

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Expression

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Specificity

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Detectable

Cell line

Detectable

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Antibodies

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TSPAN9
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TISSUE ATLAS PRIMARY DATA STOMACH

GENE/PROTEIN

Antibody validation


Dictionary

Stomach, lower
Stomach, upper

Tissue proteome

Stomach

STOMACH - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:5.1TPM
GTEx:7.7RPKM

STOMACH 1 - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody HPA014002

 

Glandular cells

Low  
 
 
 

STOMACH 2 - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA014002

 

Glandular cells

Medium  
 
 
 

STOMACH - HPA RNA-seq

Average TPM

5.1

overview Female, age 33
Sample 1
TPM: 5.0
Cell types%
Glandular cells: 60
Smooth muscle cells: 5
Other cell types: 35
N/A Male, age 82
Sample 2
TPM: 6.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 5
Other cell types: 30
overview Male, age 71
Sample 3
TPM: 4.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 5
Other cell types: 45
overview Female, age 66
Sample 4
TPM: 4.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 10
Other cell types: 40

STOMACH - GTEx RNA-seq

Average RPKM

7.7

GTEx sample id

RPKM

 

Stomach

Stomach
RPKM: 7.7
Samples: 193

Max RPKM: 20.3
Min RPKM: 3.2
Std RPKM: 4
Median RPKM: 5.8
GTEX-UPK5-2126-SM-4JBJK 20.3
GTEX-TKQ2-0926-SM-4DXU5 19.6
GTEX-UJHI-1026-SM-4IHJP 17.7
GTEX-T5JC-1926-SM-4DM6Q 17.6
GTEX-ZE7O-3026-SM-51MS4 17.6
GTEX-13QJ3-2726-SM-5SI6L 17.0
GTEX-146FR-2026-SM-5NQAI 16.8
GTEX-131XE-2226-SM-5PNYX 16.7
GTEX-XAJ8-0326-SM-47JYI 16.7
GTEX-WZTO-2126-SM-4PQYW 16.5
GTEX-1211K-1426-SM-5FQTF 16.1
GTEX-11EI6-2426-SM-5PNVS 15.9
GTEX-11P82-0726-SM-5PNYL 15.9
GTEX-WFJO-1126-SM-4LVLZ 15.1
GTEX-12WSJ-0926-SM-5P9JD 15.0
GTEX-1399U-1626-SM-5P9J3 14.9
GTEX-13O3Q-2126-SM-5KM4C 14.8
GTEX-11WQK-2626-SM-5EQ4K 14.1
GTEX-13N1W-2026-SM-5K7YU 14.1
GTEX-13O61-1126-SM-5L3FI 14.1
GTEX-14BMV-2226-SM-5RQHX 13.9
GTEX-ZPIC-2026-SM-57WG3 13.7
GTEX-11VI4-0326-SM-5EQ6L 13.6
GTEX-OIZH-1526-SM-3NB1J 13.6
GTEX-R55G-1126-SM-48FDG 13.4
GTEX-13OVI-2426-SM-5KM4J 13.1
GTEX-13111-1226-SM-5GCNC 12.8
GTEX-P4QT-1526-SM-3NMCT 12.6
GTEX-U8T8-1226-SM-4E3IH 12.6
GTEX-WH7G-1526-SM-4LVMX 12.6
GTEX-RU1J-0526-SM-46MUT 12.5
GTEX-XPVG-1526-SM-4B66C 12.4
GTEX-146FH-2126-SM-5SI9U 12.2
GTEX-139D8-2326-SM-5IFGE 12.1
GTEX-UPIC-1826-SM-4IHKC 12.0
GTEX-13X6H-1626-SM-5Q5CT 11.9
GTEX-TKQ1-0526-SM-4DXTG 11.9
GTEX-ZV6S-0926-SM-57WGB 11.9
GTEX-PLZ6-0826-SM-3P61K 11.8
GTEX-1339X-1426-SM-5K7YO 11.7
GTEX-ZTX8-0426-SM-59HLG 11.7
GTEX-SIU7-1426-SM-4BRWT 11.6
GTEX-Y3I4-1626-SM-4TT7W 11.5
GTEX-R55D-1526-SM-48FEJ 11.3
GTEX-R55C-1026-SM-48FCM 11.2
GTEX-S4Z8-1226-SM-4AD6W 11.2
GTEX-ZYVF-2726-SM-5GID4 11.2
GTEX-11EQ9-1226-SM-5987E 11.1
GTEX-YEC3-1426-101806-SM-5PNXX 11.1
GTEX-Y8E4-1526-SM-4WWDI 10.9
GTEX-11P7K-1726-SM-5GU6F 10.5
GTEX-145MO-2226-SM-5Q5BN 10.5
GTEX-S7SF-0626-SM-4AD4V 10.5
GTEX-P4PQ-1526-SM-3NMCK 9.8
GTEX-139YR-1926-SM-5LZXM 9.6
GTEX-S4P3-0726-SM-4AD57 9.6
GTEX-12C56-0526-SM-5FQST 9.5
GTEX-12WSD-2326-SM-59HKQ 9.4
GTEX-XBEW-1826-SM-4RTWX 9.2
GTEX-R53T-1226-SM-48FCT 8.9
GTEX-WHWD-1426-SM-4OORU 8.8
GTEX-XV7Q-1326-SM-4BRWM 8.7
GTEX-RTLS-2626-SM-46MUJ 8.6
GTEX-13U4I-2526-SM-5SI8Z 8.5
GTEX-13RTK-0226-SM-5RQHR 8.4
GTEX-NFK9-1526-SM-3LK7B 8.4
GTEX-13FH7-1026-SM-5IJGF 8.0
GTEX-Y114-1226-SM-4TT88 8.0
GTEX-ZZPU-1426-SM-5GZZ6 8.0
GTEX-XQ8I-2026-SM-4BOOL 7.7
GTEX-QMRM-1126-SM-447BN 7.5
GTEX-O5YW-1526-SM-3MJGL 7.4
GTEX-ZVT3-2126-SM-59HL2 7.4
GTEX-S4Q7-0726-SM-4AD5F 7.2
GTEX-T8EM-1226-SM-4DM5J 7.1
GTEX-YJ8A-1526-SM-5P9FT 7.1
GTEX-13113-0726-SM-5LZUF 7.0
GTEX-132AR-2426-SM-5IFFD 7.0
GTEX-ZLV1-0826-SM-4WWEQ 7.0
GTEX-ZXES-1426-SM-5NQ8S 6.9
GTEX-PW2O-1226-SM-48TCH 6.6
GTEX-SNOS-0826-SM-4DM5N 6.6
GTEX-117YW-2226-SM-5N9DB 6.5
GTEX-Y9LG-1026-SM-5IFJN 6.5
GTEX-13QBU-1126-SM-5LU44 6.3
GTEX-145LT-1426-SM-5O9B3 6.3
GTEX-U4B1-1026-SM-4DXT1 6.3
GTEX-P78B-1826-SM-3P5YX 6.2
GTEX-UJMC-1226-SM-4IHLI 6.2
GTEX-ZYY3-1726-SM-5EGH3 6.1
GTEX-144GN-1226-SM-5O991 5.9
GTEX-145ME-1026-SM-5O9B4 5.9
GTEX-POMQ-0826-SM-3P61H 5.9
GTEX-QXCU-1926-SM-48FE4 5.9
GTEX-S4UY-1626-SM-4AD55 5.9
GTEX-U3ZN-2026-SM-4DXUC 5.8
GTEX-XBED-1226-SM-4AT5V 5.8
GTEX-131XF-1226-SM-5HL8V 5.7
GTEX-S3XE-1026-SM-4AD4O 5.7
GTEX-TMMY-1626-SM-4DXTY 5.7
GTEX-11TT1-0726-SM-5GU5A 5.6
GTEX-QDVN-1226-SM-48TZ5 5.6
GTEX-T6MO-0726-SM-4DM58 5.6
GTEX-WEY5-1226-SM-4LMIQ 5.6
GTEX-13S7M-1826-SM-5RQK6 5.5
GTEX-V1D1-1726-SM-4JBHB 5.5
GTEX-V955-1326-SM-4JBHR 5.5
GTEX-WFG8-1326-SM-4LVN3 5.5
GTEX-XUJ4-1226-SM-4BOPD 5.5
GTEX-OXRK-1626-SM-3NB17 5.4
GTEX-Q734-1026-SM-48U16 5.4
GTEX-ZAB4-1526-SM-5CVN7 5.4
GTEX-132QS-1826-SM-5IFFN 5.3
GTEX-133LE-1326-SM-5IFGO 5.3
GTEX-12WSG-2026-SM-5FQUU 5.2
GTEX-144GM-1726-SM-5O9AS 5.2
GTEX-SUCS-0926-SM-4DM4Z 5.2
GTEX-WFG7-1326-SM-4LMK1 5.2
GTEX-WRHK-0626-SM-4MVOE 5.2
GTEX-Y5LM-1326-SM-5RQIS 5.2
GTEX-111YS-1126-SM-5GZYQ 5.1
GTEX-1399S-1626-SM-5P9GI 5.1
GTEX-145MN-1326-SM-5NQ9S 5.1
GTEX-OOBJ-1526-SM-3NB1Q 5.1
GTEX-PWOO-1226-SM-48TCO 5.1
GTEX-WHPG-0426-SM-4M1XW 5.1
GTEX-ZF2S-1426-SM-57WET 5.1
GTEX-ZVP2-1626-SM-5GU5D 5.1
GTEX-PWN1-1526-SM-48TDA 5.0
GTEX-Q2AI-0826-SM-48TZO 5.0
GTEX-SNMC-0626-SM-4DM6H 5.0
GTEX-Y3IK-1426-SM-4YCES 5.0
GTEX-ZP4G-1226-SM-4WWCJ 5.0
GTEX-11NUK-2426-SM-5BC4U 4.9
GTEX-OHPK-1526-SM-3MJGM 4.9
GTEX-RM2N-0826-SM-48FD3 4.9
GTEX-Y5V6-1326-SM-4VDTF 4.9
GTEX-ZLFU-1326-SM-4WWET 4.9
GTEX-ZV7C-1626-SM-5NQ7E 4.9
GTEX-11EM3-1026-SM-5A5KL 4.8
GTEX-1399R-1126-SM-5IFIO 4.8
GTEX-13PVQ-2126-SM-5L3FW 4.8
GTEX-P4PP-1526-SM-3P61M 4.8
GTEX-T5JW-0926-SM-4DM5K 4.8
GTEX-13CF3-1926-SM-5K7WF 4.7
GTEX-PX3G-1526-SM-48U11 4.7
GTEX-QDVJ-1426-SM-48U1Y 4.7
GTEX-QV44-1226-SM-4R1KE 4.7
GTEX-ZYFG-1326-SM-5GICJ 4.7
GTEX-QV31-0626-SM-447C5 4.6
GTEX-S341-0626-SM-4AD5T 4.6
GTEX-VJYA-1026-SM-4KL21 4.6
GTEX-117YX-1026-SM-5H11V 4.5
GTEX-12BJ1-1726-SM-5HL9B 4.4
GTEX-131XG-1226-SM-5EGH9 4.4
GTEX-13D11-2126-SM-5IFH2 4.4
GTEX-WFON-1126-SM-4LVMA 4.4
GTEX-ZQUD-0826-SM-57WDQ 4.4
GTEX-11I78-1726-SM-5A5M3 4.3
GTEX-12WSK-1426-SM-5CVNN 4.3
GTEX-QLQ7-0826-SM-447B3 4.3
GTEX-ZVZP-1726-SM-5GZWY 4.3
GTEX-11DXX-1326-SM-5GIDZ 4.2
GTEX-X15G-1126-SM-4PQZG 4.2
GTEX-Y8LW-0826-SM-4WWDO 4.2
GTEX-12696-1726-SM-5EQLH 4.1
GTEX-13O21-0926-SM-5IFGT 4.1
GTEX-W5WG-1726-SM-4LMI5 4.1
GTEX-YFCO-0826-SM-5LUAG 4.1
GTEX-ZPU1-1626-SM-4WWB2 4.1
GTEX-111CU-0926-SM-5EGIK 4.0
GTEX-1122O-1926-SM-5EGIQ 4.0
GTEX-11NSD-1426-SM-5HL67 4.0
GTEX-14BMU-1126-SM-5RQJ8 4.0
GTEX-QCQG-0526-SM-48U2A 4.0
GTEX-RWS6-0926-SM-47JXE 4.0
GTEX-S95S-0826-SM-4B64N 4.0
GTEX-ZY6K-0726-SM-5A5L8 4.0
GTEX-PWCY-0926-SM-48TD7 3.9
GTEX-ZA64-0826-SM-5HL9U 3.9
GTEX-13FTW-1726-SM-5KM2B 3.8
GTEX-XUZC-0726-SM-4BOPH 3.8
GTEX-ZZ64-0426-SM-5E43F 3.8
GTEX-Q2AH-1126-SM-48TZM 3.6
GTEX-XXEK-0826-SM-4BRWG 3.6
GTEX-YEC4-1426-SM-5IFHS 3.6
GTEX-ZT9W-1526-SM-4YCDE 3.6
GTEX-11GSP-2126-SM-5HL5E 3.5
GTEX-13FTX-0726-SM-5N9BI 3.5
GTEX-13OW6-2526-SM-5IJEC 3.5
GTEX-QLQW-0726-SM-447AA 3.5
GTEX-ZVT2-1626-SM-51MRC 3.4
GTEX-ZDYS-1926-SM-5HL59 3.2
Show all

STOMACH - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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