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TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:77.1TPM
GTEx:24.2RPKM
FANTOM5:89.4Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Low
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA047752

 

Antibody CAB017042

 

Cells in red pulp

Medium   Low  

Cells in white pulp

Medium   Not detected  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

77.1

overview Female, age 60
Sample 1
TPM: 66.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 63.3
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 74.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 73.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 107.9
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

24.2

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 24.2
Samples: 104

Max RPKM: 36.3
Min RPKM: 11.4
Std RPKM: 5
Median RPKM: 23.3
GTEX-1211K-0426-SM-5FQTP 36.3
GTEX-139T6-0226-SM-5IFGZ 35.8
GTEX-R55G-0226-SM-48FEI 35.0
GTEX-132QS-0226-SM-5IFFZ 33.5
GTEX-XXEK-0126-SM-4BRVU 33.0
GTEX-X3Y1-0126-SM-4PQZA 32.8
GTEX-Y5LM-0326-SM-4VBRN 32.0
GTEX-11P7K-0426-SM-5BC5H 31.4
GTEX-13PVR-0326-SM-5RQJY 31.4
GTEX-11DXX-0726-SM-5H12X 31.2
GTEX-ZP4G-0326-SM-4YCEF 31.2
GTEX-11P81-1326-SM-5GU5S 30.5
GTEX-YB5K-1926-SM-4VDT4 30.5
GTEX-13FH7-1326-SM-5IFG8 30.2
GTEX-144GN-2126-SM-5O99D 29.9
GTEX-14E6E-1226-SM-5S2R5 29.8
GTEX-YEC4-0126-SM-4W21T 29.8
GTEX-XV7Q-0126-SM-4BRVK 29.6
GTEX-XMK1-0126-SM-4B65F 29.2
GTEX-XGQ4-0126-SM-4AT4H 29.1
GTEX-11XUK-0426-SM-5EQML 29.0
GTEX-12WSK-0126-SM-5GCO7 29.0
GTEX-Y114-0726-SM-4TT6U 28.7
GTEX-131XE-1126-SM-5EGHW 28.6
GTEX-13S86-0126-SM-5S2PI 28.6
GTEX-11VI4-0126-SM-5GU6Z 28.1
GTEX-146FR-1926-SM-5NQA6 27.8
GTEX-QCQG-0226-SM-48U28 27.8
GTEX-ZVP2-0526-SM-51MSC 27.8
GTEX-WHWD-0126-SM-4OORS 27.6
GTEX-Y8LW-0126-SM-4VBS1 27.5
GTEX-12BJ1-0726-SM-5EGGF 27.3
GTEX-ZLFU-0526-SM-4WWBN 27.3
GTEX-X4LF-0226-SM-4QAS8 27.2
GTEX-1122O-0526-SM-5N9DM 26.7
GTEX-XAJ8-0126-SM-47JYG 26.6
GTEX-YFCO-0926-SM-5LUA5 26.4
GTEX-Z9EW-0726-SM-5HL9H 26.4
GTEX-Q2AH-0226-SM-48U1I 26.2
GTEX-XUJ4-0226-SM-4BOP8 25.6
GTEX-14DAR-0326-SM-5S2PS 25.4
GTEX-13CF3-0226-SM-5J1NW 25.3
GTEX-W5WG-0626-SM-4SOID 25.2
GTEX-1399S-0226-SM-5IFFG 25.0
GTEX-11LCK-0126-SM-5A5M5 24.6
GTEX-QMRM-0226-SM-4R1K7 24.6
GTEX-WFON-0126-SM-4LVM9 24.5
GTEX-ZV6S-0826-SM-5NQ6Z 23.8
GTEX-117YX-2126-SM-5GIEL 23.6
GTEX-ZZPU-0126-SM-5E446 23.5
GTEX-YB5E-0426-SM-5IFHR 23.4
GTEX-ZPU1-1026-SM-4YCEQ 23.4
GTEX-131XG-0426-SM-5IFGD 23.3
GTEX-13N11-0126-SM-5KM2Z 23.3
GTEX-13PL7-1126-SM-5MR5O 23.3
GTEX-ZYFG-0726-SM-5GIDX 23.3
GTEX-13VXT-1326-SM-5LU3Y 23.2
GTEX-OIZH-0926-SM-48TBR 23.1
GTEX-13111-0126-SM-5EGHO 23.0
GTEX-VJYA-0126-SM-4KL1P 23.0
GTEX-ZAB5-0526-SM-5CVMU 23.0
GTEX-12WSG-0926-SM-5EGIH 22.9
GTEX-147F3-0126-SM-5NQBJ 22.9
GTEX-139YR-0426-SM-5IFFV 22.4
GTEX-QV31-0126-SM-447BP 22.0
GTEX-XPVG-0626-SM-4B65B 22.0
GTEX-OOBJ-0926-SM-48TDO 21.7
GTEX-Y3I4-0126-SM-4TT26 21.7
GTEX-ZVZP-0726-SM-59HKA 21.7
GTEX-1399R-0226-SM-5IJGG 21.6
GTEX-PX3G-0926-SM-48U12 21.5
GTEX-T5JW-0126-SM-4DM6K 21.5
GTEX-11NSD-0426-SM-5N9CR 21.4
GTEX-ZDTT-1026-SM-5KM19 21.2
GTEX-13X6H-0726-SM-5Q5BX 20.8
GTEX-QLQW-0126-SM-447BK 20.6
GTEX-11EQ9-0426-SM-5A5JY 20.5
GTEX-XQ8I-1726-SM-4BOQB 20.4
GTEX-UJHI-0126-SM-4IHLP 20.2
GTEX-ZLWG-0426-SM-4WWFA 20.2
GTEX-ZYWO-0226-SM-5GZX3 20.2
GTEX-U3ZN-0126-SM-4DXUM 20.0
GTEX-O5YT-0926-SM-48TDG 19.8
GTEX-POMQ-0126-SM-48TD6 19.8
GTEX-QDVN-0526-SM-48TZ4 19.8
GTEX-S4Z8-0226-SM-4AD5K 19.7
GTEX-QV44-0126-SM-4R1KH 19.6
GTEX-13U4I-1626-SM-5IFFR 19.4
GTEX-U3ZH-0126-SM-4DXUK 19.4
GTEX-PW2O-0126-SM-48TC8 19.0
GTEX-RUSQ-0126-SM-47JWV 18.4
GTEX-S3XE-0626-SM-4AD6B 17.8
GTEX-PLZ6-0126-SM-48TC6 17.7
GTEX-U4B1-0526-SM-4DXTK 17.7
GTEX-12WSN-0126-SM-5DUX5 17.6
GTEX-P4QS-0926-SM-48TBS 17.5
GTEX-P4PP-0926-SM-48TBZ 17.4
GTEX-12WSJ-0526-SM-5GCOZ 17.3
GTEX-145MN-0126-SM-5RQHY 17.3
GTEX-UPK5-1626-SM-4JBHI 16.5
GTEX-Q734-0226-SM-48U1A 16.4
GTEX-146FQ-0626-SM-5LU9U 16.3
GTEX-X585-1826-SM-4QAS3 14.9
GTEX-Y3IK-0126-SM-4WWE9 11.4
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

89.4

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 89.4
FF:10025-101D7 39,50,70 years, male 89.4

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