We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CLDN11
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:13.8RPKM
FANTOM5:133.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA013166

 

Antibody CAB009789

 

Glial cells

Not detected   Medium  

Neuronal cells

Not detected   Low  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

13.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 13.8
Samples: 117

Max RPKM: 49.2
Min RPKM: 1.6
Std RPKM: 9.2
Median RPKM: 11.2
GTEX-X4XX-0011-R5A-SM-46MWN 49.2
GTEX-12WSA-0011-R5b-SM-5GU5I 45.1
GTEX-WL46-0011-R5A-SM-3LK6V 43.0
GTEX-QMR6-0011-R5A-SM-32PKT 42.2
GTEX-WWYW-0011-R5A-SM-3NB3E 39.5
GTEX-13X6I-0011-R5a-SM-5PNWW 30.1
GTEX-12WSF-0011-R5a-SM-5HL8K 30.0
GTEX-13NYB-0011-R5a-SM-5MR45 29.1
GTEX-N7MS-0011-R5a-SM-2HMK8 29.1
GTEX-13O3O-0011-R5b-SM-5KM44 28.8
GTEX-13OVH-0011-R5b-SM-5KM4L 27.7
GTEX-132Q8-0011-R5a-SM-5IJDM 27.1
GTEX-PVOW-0011-R5A-SM-32PL7 26.7
GTEX-X585-0011-R5A-SM-46MVI 25.4
GTEX-11NV4-0011-R5a-SM-5NQ88 24.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 23.7
GTEX-Z93S-0011-R5b-SM-4RGNI 23.7
GTEX-R55E-0011-R5A-SM-2TC5N 23.4
GTEX-XOTO-0011-R5A-SM-4B657 22.1
GTEX-13NYS-0011-R5a-SM-5MR4D 21.6
GTEX-13FLV-0011-R5a-SM-5LZWT 20.6
GTEX-RVPV-0011-R5A-SM-2TF69 20.3
GTEX-WZTO-0011-R5B-SM-3NMC5 19.7
GTEX-12WSB-0011-R5b-SM-5GU67 19.4
GTEX-13X6K-0011-R5b-SM-5PNUE 18.7
GTEX-NPJ7-0011-R5a-SM-33HBK 18.3
GTEX-NL4W-0011-R5a-SM-2I3GD 18.0
GTEX-OHPN-0011-R5A-SM-2I5FF 17.9
GTEX-YFC4-0011-R5a-SM-4RGLR 17.3
GTEX-14BIN-0011-R5b-SM-5SI78 16.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 16.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 15.7
GTEX-13JVG-0011-R5a-SM-5MR4O 15.5
GTEX-ZXG5-0011-R5b-SM-57WBN 15.5
GTEX-144GL-0011-R5b-SM-5PNUJ 15.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 14.8
GTEX-13FXS-0011-R5b-SM-5LZYE 14.7
GTEX-145LS-0011-R5a-SM-5SI65 14.6
GTEX-13OW5-0011-R5b-SM-5L3FR 14.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 14.3
GTEX-13S7M-0011-R5b-SM-5P9HS 14.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 14.3
GTEX-13FHP-0011-R5b-SM-5LZY2 13.6
GTEX-12WSH-0011-R5b-SM-5P9F3 13.4
GTEX-RVPU-0011-R5A-SM-2XCAD 13.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 13.1
GTEX-ZUA1-0011-R5b-SM-51MTG 12.9
GTEX-WVLH-0011-R5A-SM-3MJFW 12.6
GTEX-QVJO-0011-R5A-SM-2S1QM 12.4
GTEX-11H98-0011-R5b-SM-57WCF 12.3
GTEX-11WQC-0011-R5a-SM-5BC74 12.3
GTEX-13OW7-0011-R5b-SM-5O9DM 12.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 11.8
GTEX-13FLW-0011-R5a-SM-5LZX6 11.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 11.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 11.3
GTEX-13OVL-0011-R5b-SM-5L3FU 11.3
GTEX-13112-0011-R5b-SM-5DUV8 11.2
GTEX-13OW6-0011-R5a-SM-5O9BK 11.2
GTEX-ZVT3-0011-R5a-SM-51MSI 11.2
GTEX-XMD1-0011-R5A-SM-4AT47 11.1
GTEX-12WSD-0011-R5b-SM-5CVNG 11.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 11.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 11.0
GTEX-144GO-0011-R5a-SM-5PNUR 10.1
GTEX-13JUV-0011-R5a-SM-5LZY5 9.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 9.9
GTEX-131YS-0011-R5b-SM-5K7YB 9.8
GTEX-13CF2-0011-R5a-SM-5LZWS 9.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 9.8
GTEX-N7MT-0011-R5a-SM-2I3G6 9.6
GTEX-1445S-0011-R5a-SM-5PNUS 9.5
GTEX-ZE7O-0011-R5a-SM-57WBO 9.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 9.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 8.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 8.7
GTEX-13VXU-0011-R5a-SM-5O9D7 8.7
GTEX-139TS-0011-R5b-SM-5J2MZ 8.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 8.6
GTEX-NL3H-0011-R5a-SM-2I3GB 8.4
GTEX-P44H-0011-R5A-SM-2XCEX 8.0
GTEX-S7SE-0011-R5A-SM-2XCDA 7.9
GTEX-14BIM-0011-R5b-SM-5S2RM 7.7
GTEX-14ABY-0011-R5b-SM-5SI7B 7.6
GTEX-145MH-0011-R5a-SM-5P9JT 7.5
GTEX-UTHO-0011-R5A-SM-3GIJD 7.5
GTEX-RU72-0011-R5A-SM-2TF6U 7.3
GTEX-11GSP-0011-R5a-SM-57WBE 7.2
GTEX-1399T-0011-R5b-SM-5IJDK 7.2
GTEX-12WSC-0011-R5b-SM-5CVNS 7.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 7.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 7.0
GTEX-T5JC-0011-R5A-SM-32PLK 6.9
GTEX-139T8-0011-R5b-SM-5J1MO 6.8
GTEX-13SLX-0011-R5a-SM-5O9BV 6.6
GTEX-1477Z-0011-R5b-SM-5PNUO 6.6
GTEX-ZV68-0011-R5a-SM-4YCDW 6.6
GTEX-1313W-0011-R5b-SM-5L3EP 6.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 6.5
GTEX-12ZZX-0011-R5a-SM-5HL89 6.0
GTEX-TSE9-0011-R5A-SM-3DB7J 6.0
GTEX-13CZV-0011-R5a-SM-5K7XA 5.8
GTEX-11OF3-0011-R5a-SM-57WB4 5.7
GTEX-13X6J-0011-R5b-SM-5PNWT 5.7
GTEX-T6MN-0011-R5A-SM-32QPD 5.5
GTEX-X261-0011-R5A-SM-3NMB4 5.4
GTEX-OXRN-0011-R5A-SM-2I5EF 5.3
GTEX-YJ89-0011-R5a-SM-4V6GM 5.1
GTEX-139TT-0011-R5b-SM-5K7W8 5.0
GTEX-13G51-0011-R5a-SM-5L3EB 5.0
GTEX-T2IS-0011-R5A-SM-32QP4 4.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 4.3
GTEX-11UD1-0011-R5b-SM-5P9FP 4.2
GTEX-S7PM-0011-R5A-SM-3NM8G 4.2
GTEX-13NZA-0011-R5b-SM-5KM4K 2.8
GTEX-145MG-0011-R5b-SM-5S2VU 1.9
GTEX-13CIG-0011-R5b-SM-5L3F2 1.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

133.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 133.9
FF:10164-103B2 76 years, female 146.4
FF:10379-105H1 89 years, female 121.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.