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CD74
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    TISSUE

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    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:84.4RPKM
FANTOM5:660.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA010592

 

Antibody CAB002506

 

Glial cells

Medium   Low  

Neuronal cells

Not detected   Low  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

84.4

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 84.4
Samples: 117

Max RPKM: 586.1
Min RPKM: 10.1
Std RPKM: 82.8
Median RPKM: 55.4
GTEX-OHPN-0011-R5A-SM-2I5FF 586.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 374.2
GTEX-X585-0011-R5A-SM-46MVI 358.8
GTEX-XMD1-0011-R5A-SM-4AT47 275.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 240.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 239.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 232.8
GTEX-NL4W-0011-R5a-SM-2I3GD 229.8
GTEX-N7MT-0011-R5a-SM-2I3G6 228.2
GTEX-132Q8-0011-R5a-SM-5IJDM 218.1
GTEX-12WSA-0011-R5b-SM-5GU5I 209.8
GTEX-X4XX-0011-R5A-SM-46MWN 172.6
GTEX-139TS-0011-R5b-SM-5J2MZ 164.6
GTEX-144GO-0011-R5a-SM-5PNUR 160.4
GTEX-12WSB-0011-R5b-SM-5GU67 158.1
GTEX-13X6I-0011-R5a-SM-5PNWW 152.2
GTEX-13JUV-0011-R5a-SM-5LZY5 148.0
GTEX-NL3H-0011-R5a-SM-2I3GB 146.2
GTEX-RVPU-0011-R5A-SM-2XCAD 131.7
GTEX-1477Z-0011-R5b-SM-5PNUO 131.2
GTEX-1399T-0011-R5b-SM-5IJDK 131.1
GTEX-RVPV-0011-R5A-SM-2TF69 130.5
GTEX-QVJO-0011-R5A-SM-2S1QM 129.9
GTEX-12WSF-0011-R5a-SM-5HL8K 117.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 106.7
GTEX-145LS-0011-R5a-SM-5SI65 106.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 103.2
GTEX-WWYW-0011-R5A-SM-3NB3E 102.8
GTEX-QMR6-0011-R5A-SM-32PKT 98.8
GTEX-13OW6-0011-R5a-SM-5O9BK 97.0
GTEX-T5JC-0011-R5A-SM-32PLK 94.7
GTEX-11GSP-0011-R5a-SM-57WBE 92.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 92.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 91.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 90.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 89.4
GTEX-11OF3-0011-R5a-SM-57WB4 86.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 85.5
GTEX-13VXU-0011-R5a-SM-5O9D7 83.1
GTEX-11NV4-0011-R5a-SM-5NQ88 83.0
GTEX-N7MS-0011-R5a-SM-2HMK8 81.2
GTEX-TSE9-0011-R5A-SM-3DB7J 80.3
GTEX-OXRN-0011-R5A-SM-2I5EF 79.0
GTEX-ZVT3-0011-R5a-SM-51MSI 76.2
GTEX-WL46-0011-R5A-SM-3LK6V 76.0
GTEX-13OW5-0011-R5b-SM-5L3FR 74.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 71.9
GTEX-14ABY-0011-R5b-SM-5SI7B 68.7
GTEX-13FLV-0011-R5a-SM-5LZWT 67.4
GTEX-1445S-0011-R5a-SM-5PNUS 67.4
GTEX-R55E-0011-R5A-SM-2TC5N 66.4
GTEX-14BIM-0011-R5b-SM-5S2RM 65.8
GTEX-13G51-0011-R5a-SM-5L3EB 63.5
GTEX-YFC4-0011-R5a-SM-4RGLR 62.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 60.4
GTEX-13X6K-0011-R5b-SM-5PNUE 59.8
GTEX-P44H-0011-R5A-SM-2XCEX 58.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 58.3
GTEX-12WSH-0011-R5b-SM-5P9F3 55.4
GTEX-145MH-0011-R5a-SM-5P9JT 55.4
GTEX-131YS-0011-R5b-SM-5K7YB 55.2
GTEX-13FLW-0011-R5a-SM-5LZX6 52.6
GTEX-X261-0011-R5A-SM-3NMB4 52.5
GTEX-13NYS-0011-R5a-SM-5MR4D 52.4
GTEX-Z93S-0011-R5b-SM-4RGNI 51.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50.8
GTEX-11H98-0011-R5b-SM-57WCF 49.8
GTEX-13NZA-0011-R5b-SM-5KM4K 49.2
GTEX-13OVH-0011-R5b-SM-5KM4L 48.2
GTEX-UTHO-0011-R5A-SM-3GIJD 48.1
GTEX-12WSD-0011-R5b-SM-5CVNG 46.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 43.9
GTEX-13CIG-0011-R5b-SM-5L3F2 42.5
GTEX-1313W-0011-R5b-SM-5L3EP 41.2
GTEX-13CZV-0011-R5a-SM-5K7XA 40.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40.4
GTEX-T6MN-0011-R5A-SM-32QPD 39.6
GTEX-YJ89-0011-R5a-SM-4V6GM 39.4
GTEX-13OVL-0011-R5b-SM-5L3FU 39.3
GTEX-12WSC-0011-R5b-SM-5CVNS 38.7
GTEX-12ZZX-0011-R5a-SM-5HL89 38.5
GTEX-ZXG5-0011-R5b-SM-57WBN 37.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 37.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 37.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 36.8
GTEX-11WQC-0011-R5a-SM-5BC74 36.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 36.0
GTEX-13FXS-0011-R5b-SM-5LZYE 35.1
GTEX-13S7M-0011-R5b-SM-5P9HS 35.0
GTEX-13OW7-0011-R5b-SM-5O9DM 33.6
GTEX-ZE7O-0011-R5a-SM-57WBO 33.5
GTEX-PVOW-0011-R5A-SM-32PL7 32.5
GTEX-13X6J-0011-R5b-SM-5PNWT 31.3
GTEX-144GL-0011-R5b-SM-5PNUJ 31.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 31.1
GTEX-ZUA1-0011-R5b-SM-51MTG 30.9
GTEX-13FHP-0011-R5b-SM-5LZY2 30.3
GTEX-S7PM-0011-R5A-SM-3NM8G 29.1
GTEX-ZV68-0011-R5a-SM-4YCDW 29.1
GTEX-139T8-0011-R5b-SM-5J1MO 26.5
GTEX-WZTO-0011-R5B-SM-3NMC5 26.4
GTEX-14BIN-0011-R5b-SM-5SI78 25.6
GTEX-13112-0011-R5b-SM-5DUV8 25.1
GTEX-WVLH-0011-R5A-SM-3MJFW 25.0
GTEX-139TT-0011-R5b-SM-5K7W8 23.9
GTEX-NPJ7-0011-R5a-SM-33HBK 23.1
GTEX-XOTO-0011-R5A-SM-4B657 22.4
GTEX-13SLX-0011-R5a-SM-5O9BV 22.0
GTEX-13JVG-0011-R5a-SM-5MR4O 21.8
GTEX-T2IS-0011-R5A-SM-32QP4 21.3
GTEX-13O3O-0011-R5b-SM-5KM44 20.5
GTEX-RU72-0011-R5A-SM-2TF6U 20.4
GTEX-13CF2-0011-R5a-SM-5LZWS 20.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 20.0
GTEX-13NYB-0011-R5a-SM-5MR45 17.3
GTEX-11UD1-0011-R5b-SM-5P9FP 14.9
GTEX-145MG-0011-R5b-SM-5S2VU 10.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

660.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 660.4
FF:10164-103B2 76 years, female 1002.9
FF:10379-105H1 89 years, female 317.8

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