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CD74
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    TISSUE

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    CELL

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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:516.9TPM
GTEx:42.8RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA010592

 

Antibody CAB002506

 

Endothelial cells

Medium   Low  

Glial cells

Not detected   Low  

Neuronal cells

Not detected   Not detected  

Neuropil

Not detected   Not detected  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

516.9

N/A Male, age 5
Sample 1
TPM: 715.7
overview Female, age 40
Sample 2
TPM: 118.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 716.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

42.8

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 39.5
Samples: 114

Max RPKM: 192.4
Min RPKM: 7.7
Std RPKM: 32.1
Median RPKM: 29.8
GTEX-X585-3026-SM-46MWF 192.4
GTEX-132Q8-3026-SM-5PNVG 180.9
GTEX-N7MT-1126-SM-5SI7V 109.3
GTEX-11TTK-2926-SM-5PNYP 108.3
GTEX-PWO3-0926-SM-2I5EY 108.0
GTEX-13NYC-2826-SM-5K7WR 105.5
GTEX-13JUV-2926-SM-5LZX7 97.8
GTEX-12WSA-2926-SM-5EQ4D 96.1
GTEX-QVJO-1426-SM-2S1QY 95.7
GTEX-11EI6-3026-SM-5GZZO 88.2
GTEX-11WQK-3026-SM-5EQL6 87.5
GTEX-11DXY-3226-SM-5GIDE 85.9
GTEX-145LS-3126-SM-5Q5BY 82.0
GTEX-11NV4-2126-SM-5N9DS 77.3
GTEX-13OVJ-2826-SM-5L3GW 77.0
GTEX-144FL-3026-SM-5O99C 73.9
GTEX-13X6K-2926-SM-5Q5D5 67.8
GTEX-1445S-3026-SM-5O9BR 64.0
GTEX-QVUS-2826-SM-3GADB 62.0
GTEX-13QIC-2926-SM-5J2NF 60.6
GTEX-1399T-3026-SM-5KLZC 59.8
GTEX-11ONC-2926-SM-5P9JM 58.8
GTEX-131YS-3126-SM-5KLYT 58.7
GTEX-NPJ8-1526-SM-2D7VU 57.9
GTEX-13JVG-3126-SM-5L3FH 53.2
GTEX-WHSE-3026-SM-3P5ZH 53.0
GTEX-11OC5-0726-SM-5P9JK 51.9
GTEX-13FHO-3026-SM-5J1O9 49.2
GTEX-117XS-3026-SM-5N9CA 48.9
GTEX-QMR6-1426-SM-32PLA 48.2
GTEX-13PVQ-3026-SM-5SI93 47.0
GTEX-13NYS-3126-SM-5KLYV 45.5
GTEX-14BMV-3026-SM-5S2PQ 45.1
GTEX-ZZPT-3026-SM-5GZXH 44.4
GTEX-ZAJG-3126-SM-5HL9J 44.2
GTEX-X4XX-3026-SM-3NMB2 43.5
GTEX-111FC-3126-SM-5GZZ2 42.6
GTEX-XLM4-3026-SM-4AT6L 41.5
GTEX-12126-1026-SM-5P9JJ 40.1
GTEX-1192X-3126-SM-5N9BY 40.0
GTEX-11GSP-3226-SM-5986O 39.8
GTEX-11NUK-2926-SM-5A5MD 38.9
GTEX-11PRG-2926-SM-5987A 38.2
GTEX-WWYW-3126-SM-3NB39 36.7
GTEX-WZTO-2926-SM-3NM9I 36.1
GTEX-13FXS-3126-SM-5J2NN 35.0
GTEX-13IVO-2926-SM-5L3CZ 33.0
GTEX-13S7M-3126-SM-5RQJQ 33.0
GTEX-ZUA1-3026-SM-59HJC 32.7
GTEX-11O72-2926-SM-5BC4V 32.2
GTEX-13X6J-3026-SM-5Q5CU 32.1
GTEX-12WSD-3126-SM-5HL7P 32.0
GTEX-12WSC-3026-SM-5GCNF 31.4
GTEX-139T8-1026-SM-5J2MC 30.8
GTEX-Y8DK-0826-SM-4TT3T 30.8
GTEX-11GS4-3126-SM-5A5LH 30.0
GTEX-11GSO-2926-SM-5HL73 29.8
GTEX-1313W-3126-SM-5LZUI 29.8
GTEX-12ZZY-3026-SM-5GCOU 28.8
GTEX-Y111-2726-SM-4TT3N 28.8
GTEX-ZVT3-3026-SM-5E43N 28.7
GTEX-Q2AG-2926-SM-2HMJ3 27.9
GTEX-NPJ7-2726-SM-2I3FT 27.7
GTEX-13OVH-3026-SM-5MR4N 26.5
GTEX-T2IS-3026-SM-32QPM 25.9
GTEX-13OW6-3026-SM-5J2MI 25.3
GTEX-145MH-3026-SM-5Q5DZ 25.0
GTEX-11ZUS-2926-SM-5FQSL 24.9
GTEX-12ZZW-2926-SM-5LZUP 24.7
GTEX-13VXU-2926-SM-5LU5C 24.2
GTEX-13O3O-3126-SM-5KM3H 23.9
GTEX-YJ89-3026-SM-5IFJI 23.2
GTEX-13G51-3026-SM-5IJB8 23.1
GTEX-145MG-3026-SM-5RQJA 22.4
GTEX-13O3Q-2926-SM-5KM45 22.1
GTEX-13FLW-1426-SM-5K7YE 21.7
GTEX-UTHO-3026-SM-3GAFB 21.3
GTEX-ZAK1-3026-SM-5S2MJ 20.8
GTEX-147GR-3026-SM-5S2ML 20.4
GTEX-T6MN-2626-SM-32PMQ 19.7
GTEX-14ASI-3026-SM-5S2PN 19.4
GTEX-13FHP-3026-SM-5IJBS 18.8
GTEX-145MF-2726-SM-5O995 18.5
GTEX-RNOR-2326-SM-2TF4I 18.2
GTEX-T5JC-2426-SM-3NMDB 18.0
GTEX-1128S-2726-SM-5H12C 17.8
GTEX-11EMC-3226-SM-5EGKW 17.8
GTEX-QDT8-2926-SM-32PKC 17.7
GTEX-14A5I-2926-SM-5Q5CQ 17.6
GTEX-TSE9-3026-SM-3DB76 16.3
GTEX-12ZZX-2926-SM-5GCOQ 15.8
GTEX-Z93S-2926-SM-57WB9 15.8
GTEX-XOTO-3026-SM-4B65M 14.5
GTEX-12ZZZ-3026-SM-5BC67 14.4
GTEX-131XW-3126-SM-5LZUC 14.3
GTEX-PVOW-2526-SM-2XCF7 13.7
GTEX-RU72-3026-SM-5SI7Y 13.5
GTEX-YFC4-3126-SM-5PNV6 13.3
GTEX-WL46-2926-SM-3LK82 13.1
GTEX-13NYB-3026-SM-5IJD7 13.0
GTEX-ZYFD-3026-SM-5E44C 12.3
GTEX-13OW7-3026-SM-5L3GY 12.1
GTEX-144GL-3026-SM-5Q5CW 12.1
GTEX-R55F-1326-SM-5S2V4 11.4
GTEX-WVLH-3026-SM-3MJG9 11.1
GTEX-12WSH-3026-SM-5CVNI 10.8
GTEX-13SLX-3126-SM-5S2Q5 10.7
GTEX-ZE7O-3126-SM-5HL5X 10.6
GTEX-13PL6-3126-SM-5LUAR 10.5
GTEX-13OW8-2826-SM-5L3GC 10.2
GTEX-11OF3-2926-SM-5HL78 9.9
GTEX-OXRN-2426-SM-2I5EQ 9.6
GTEX-1117F-3226-SM-5N9CT 9.0
GTEX-11DXW-1126-SM-5H12Q 7.7
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 46.2
Samples: 108

Max RPKM: 522.6
Min RPKM: 6.3
Std RPKM: 62.2
Median RPKM: 30.3
GTEX-X4EP-0011-R10B-SM-4QASJ 522.6
GTEX-NL4W-0011-R10A-SM-2I3DY 294.5
GTEX-XMD1-0011-R10A-SM-4AT4A 197.6
GTEX-X585-0011-R10A-SM-46MUY 195.0
GTEX-11ZUS-0011-R10b-SM-5BC79 151.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 121.1
GTEX-13N2G-0011-R10a-SM-5MR34 105.2
GTEX-13QJC-0011-R10a-SM-5SI63 103.4
GTEX-QVUS-0011-R10A-SM-3GIK3 103.3
GTEX-N7MT-0011-R10A-SM-2I3E1 99.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 92.7
GTEX-11WQK-0011-R10a-SM-5BC6R 86.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 73.4
GTEX-1445S-0011-R10a-SM-5PNWB 72.3
GTEX-13NYS-0011-R10a-SM-5MR4S 70.2
GTEX-XLM4-0011-R10A-SM-4AT5P 69.2
GTEX-N7MS-0011-R10A-SM-2HMJK 68.3
GTEX-131YS-0011-R10b-SM-5EQ5N 63.7
GTEX-145LS-0011-R10a-SM-5PNUQ 60.6
GTEX-13X6K-0011-R10a-SM-5P9JR 59.1
GTEX-QMR6-0011-R10A-SM-32PKO 58.9
GTEX-13QIC-0011-R10a-SM-5O9C7 58.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 57.4
GTEX-12WSA-0011-R10b-SM-5P9ET 56.9
GTEX-13X6I-0011-R10a-SM-5PNWI 56.2
GTEX-P44H-0011-R10A-SM-2XCEK 49.9
GTEX-13FXS-0011-R10a-SM-5J2MA 49.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 49.0
GTEX-13JUV-0011-R10b-SM-5LZXR 48.1
GTEX-13G51-0011-R10b-SM-5LZYF 44.5
GTEX-ZVT3-0011-R10b-SM-57WB6 43.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 43.1
GTEX-T5JC-0011-R10A-SM-32PM2 42.3
GTEX-12WSC-0011-R10a-SM-5GU57 41.8
GTEX-X4XX-0011-R10B-SM-46MWO 41.0
GTEX-ZUA1-0011-R10a-SM-51MT6 40.0
GTEX-X261-0011-R10B-SM-4E3JT 39.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 38.9
GTEX-TSE9-0011-R10A-SM-3DB7O 38.8
GTEX-147GR-0011-R10b-SM-5S2UM 38.7
GTEX-12WSF-0011-R10a-SM-5LZVH 37.6
GTEX-OXRO-0011-R10A-SM-2I5EH 37.1
GTEX-WWYW-0011-R10A-SM-3NB35 35.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 34.6
GTEX-13X6J-0011-R10b-SM-5PNWA 34.1
GTEX-13FLW-0011-R10b-SM-5LZZF 33.6
GTEX-13O3Q-0011-R10b-SM-5KM39 33.6
GTEX-13OVL-0011-R10a-SM-5L3GS 32.3
GTEX-13SLX-0011-R10a-SM-5P9HV 32.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 32.0
GTEX-11GSP-0011-R10a-SM-5NQ7J 31.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 31.4
GTEX-1477Z-0011-R10b-SM-5S2RF 31.4
GTEX-14753-0011-R10b-SM-5S2WE 30.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 30.2
GTEX-139TS-0011-R10a-SM-5K7TU 29.3
GTEX-13FHO-0011-R10b-SM-5J2MM 28.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 27.0
GTEX-WZTO-0011-R10B-SM-4E3KB 26.6
GTEX-13JVG-0011-R10b-SM-5KM2P 26.5
GTEX-13NYB-0011-R10a-SM-5KM43 26.5
GTEX-ZVZQ-0011-R10b-SM-51MRT 25.1
GTEX-1313W-0011-R10b-SM-5DUXA 24.9
GTEX-13IVO-0011-R10a-SM-5LZY3 24.7
GTEX-145MH-0011-R10b-SM-5PNUK 24.4
GTEX-OXRN-0011-R10A-SM-2I5GC 24.3
GTEX-11WQC-0011-R10a-SM-57WCT 24.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 24.1
GTEX-11H98-0011-R10b-SM-5NQ98 23.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 23.5
GTEX-ZV68-0011-R10a-SM-51MT7 23.1
GTEX-13O3O-0011-R10a-SM-5LUA9 22.6
GTEX-13OW6-0011-R10a-SM-5L3HE 22.6
GTEX-T6MN-0011-R10A-SM-32QP7 22.4
GTEX-13NZA-0011-R10b-SM-5KM54 21.6
GTEX-YFC4-0011-R10a-SM-4SOK5 21.2
GTEX-NL3H-0011-R10A-SM-2I3E9 20.3
GTEX-12WSM-0011-R10a-SM-5DUWV 19.8
GTEX-13S7M-0011-R10b-SM-5PNZB 19.5
GTEX-145MG-0011-R10a-SM-5PNWG 19.4
GTEX-ZXG5-0011-R10a-SM-57WDD 19.4
GTEX-14BIN-0011-R10a-SM-5S2UA 19.1
GTEX-13OW8-0011-R10a-SM-5L3H6 18.9
GTEX-YJ89-0011-R10a-SM-4SOK9 18.8
GTEX-ZAB4-0011-R10a-SM-4SOKH 18.3
GTEX-12WSH-0011-R10a-SM-5LZUS 17.9
GTEX-145LU-0011-R10a-SM-5PNWJ 15.9
GTEX-13OW7-0011-R10a-SM-5L3H3 15.7
GTEX-13SLW-0011-R10a-SM-5S2UI 15.7
GTEX-ZF28-0011-R10a-SM-4WWEH 15.1
GTEX-WVLH-0011-R10A-SM-3MJFM 13.9
GTEX-S7SE-0011-R10A-SM-2XCDF 13.8
GTEX-131XH-0011-R10a-SM-5EGLJ 13.2
GTEX-WL46-0011-R10A-SM-3MJFQ 12.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.2
GTEX-12ZZX-0011-R10b-SM-5DUWK 10.8
GTEX-12126-0011-R10b-SM-5BC6T 10.7
GTEX-Z93S-0011-R10a-SM-4RGNM 10.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 10.4
GTEX-13N1W-0011-R10b-SM-5MR4H 10.0
GTEX-RVPU-0011-R10A-SM-2XCAH 10.0
GTEX-QDT8-0011-R10A-SM-32PKG 9.0
GTEX-131XW-0011-R10a-SM-5DUVA 8.5
GTEX-13CZV-0011-R10b-SM-5LZYD 8.2
GTEX-147F4-0011-R10b-SM-5S2WC 7.3
GTEX-12WSD-0011-R10b-SM-5GU79 6.9
GTEX-12WSE-0011-R10b-SM-5P9JV 6.4
GTEX-14BIL-0011-R10a-SM-5SI75 6.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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