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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.2TPM
GTEx:3.2RPKM
FANTOM5:25.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
 

Antibody staining

Antibody HPA017311

  

Adipocytes

 Medium  

Fibroblasts

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
 

Antibody staining

Antibody HPA017311

  

Adipocytes

 Medium  

Fibroblasts

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

6.2
N/A Female, age 80
Sample 1
TPM: 6.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 6.8
N/A Female, age 57
Sample 3
TPM: 4.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 6.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 6.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

3.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 3.3
Samples: 350

Max RPKM: 5.5
Min RPKM: 1.2
Std RPKM: 0.6
Median RPKM: 3.3
GTEX-SNMC-1326-SM-2XCFK 5.5
GTEX-QDT8-0226-SM-32PL4 5.4
GTEX-S33H-1126-SM-2XCB6 5.3
GTEX-ZEX8-2326-SM-5S2MN 5.3
GTEX-ZE7O-0226-SM-5S2N1 5.1
GTEX-13FHP-0226-SM-5K7WD 4.8
GTEX-O5YT-0226-SM-32PK5 4.8
GTEX-U3ZN-2626-SM-3DB7T 4.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 3.0
Samples: 227

Max RPKM: 5.7
Min RPKM: 1.2
Std RPKM: 0.8
Median RPKM: 3
GTEX-11NV4-1426-SM-5BC4W 5.7
GTEX-12ZZX-1726-SM-5BC63 5.1
GTEX-13OVL-0826-SM-5L3GV 4.7
GTEX-11OF3-0826-SM-5BC51 4.6
GTEX-13PL6-0926-SM-5KLYY 4.6
GTEX-13X6K-0726-SM-5LU2Z 4.5
GTEX-14A6H-1026-SM-5SIAZ 4.5
GTEX-ZXG5-1626-SM-59HJK 4.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

25.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 25.1
FF:10010-101C1 65,65,76 years, mixed 25.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.