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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:76.3TPM
GTEx:22.0RPKM
FANTOM5:80.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA029013

 

Antibody HPA066509

 

Glandular cells

Not detected   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

76.3

overview Male, age 65
Sample 1
TPM: 69.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 68.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 85.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 81.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

22.0

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 22.0
Samples: 88

Max RPKM: 59.6
Min RPKM: 3.8
Std RPKM: 12.7
Median RPKM: 18.7
GTEX-WRHK-1026-SM-4MVOD 59.6
GTEX-WH7G-1626-SM-4LVMY 50.3
GTEX-WFJO-0926-SM-4LVM2 48.8
GTEX-ZC5H-2326-SM-4WAYT 48.6
GTEX-UPK5-2026-SM-4JBIM 48.0
GTEX-VUSG-1726-SM-4KKZL 47.5
GTEX-11VI4-1626-SM-5EQKO 46.5
GTEX-ZLFU-1526-SM-4WWBT 45.9
GTEX-13O61-1326-SM-5KM31 45.3
GTEX-11NSD-1726-SM-5N9C3 44.5
GTEX-ZVP2-1726-SM-5GU5P 41.4
GTEX-13FH7-1226-SM-5IJFK 40.8
GTEX-Z9EW-0926-SM-5CVMM 40.2
GTEX-X15G-1426-SM-4PQZK 37.3
GTEX-11P82-0826-SM-5P9GU 36.4
GTEX-131XG-1726-SM-5LZUR 36.1
GTEX-11XUK-1426-SM-5EQMG 35.6
GTEX-1399U-2126-SM-5IFEZ 33.9
GTEX-14E6E-1626-SM-5RQI7 32.7
GTEX-ZEX8-1826-SM-57WBH 32.6
GTEX-12BJ1-1926-SM-5HL9Z 29.5
GTEX-ZQG8-2526-SM-57WEQ 28.7
GTEX-145ME-0926-SM-5O9AR 27.5
GTEX-X5EB-1626-SM-4E3IV 26.0
GTEX-13QBU-1926-SM-5IJEW 24.1
GTEX-148VJ-2226-SM-5NQ9M 24.1
GTEX-VJYA-0926-SM-4KL1N 23.2
GTEX-Y5LM-1626-SM-4VDTB 22.8
GTEX-11DXX-1626-SM-5H11H 22.6
GTEX-1399S-2026-SM-5KM4B 22.3
GTEX-XAJ8-0526-SM-47JYK 22.1
GTEX-ZZ64-0526-SM-5GZXM 21.7
GTEX-131XF-1326-SM-5GCMQ 21.6
GTEX-13CF3-1226-SM-5LZXN 21.3
GTEX-11I78-1126-SM-5A5K5 21.1
GTEX-11DXZ-1326-SM-5H11X 21.0
GTEX-11P7K-1626-SM-5GU63 20.3
GTEX-139T6-1026-SM-5IJGC 19.8
GTEX-1399R-2026-SM-5K7WN 19.8
GTEX-WEY5-1526-SM-4LMJF 19.4
GTEX-13PL7-2626-SM-5IFH4 19.3
GTEX-ZP4G-1626-SM-57WGD 19.1
GTEX-11EQ9-1326-SM-5985X 19.0
GTEX-ZTPG-2626-SM-57WFX 18.8
GTEX-ZVT2-2126-SM-5NQ93 18.5
GTEX-ZYFG-2026-SM-5E43Y 18.4
GTEX-13113-1226-SM-5EGHT 17.5
GTEX-YEC4-1726-SM-4W21E 17.5
GTEX-13RTK-0826-SM-5Q5C6 17.4
GTEX-WQUQ-2426-SM-4MVNW 17.1
GTEX-XGQ4-1326-SM-4GIDU 17.1
GTEX-139YR-2226-SM-5IFFW 17.0
GTEX-ZYWO-1526-SM-5SIAL 16.8
GTEX-XBED-1426-SM-4AT4G 16.7
GTEX-13D11-0726-SM-5LZZB 15.7
GTEX-133LE-1426-SM-5IFH1 15.6
GTEX-ZA64-1226-SM-5HL7B 14.9
GTEX-ZPIC-2326-SM-57WDW 14.8
GTEX-145LT-1026-SM-5LU9O 14.6
GTEX-Y114-1426-SM-4TT6W 14.4
GTEX-YF7O-1826-SM-5IFIU 14.3
GTEX-XUZC-1426-SM-4BRV3 14.1
GTEX-111YS-1426-SM-5GID8 14.0
GTEX-ZXES-1526-SM-5NQ95 13.8
GTEX-13O21-1026-SM-5IJDU 13.6
GTEX-ZLV1-1126-SM-4WWBW 13.2
GTEX-ZTSS-0926-SM-59865 12.8
GTEX-ZVZP-1826-SM-5GZXB 12.7
GTEX-YB5E-1526-SM-5IFIE 12.6
GTEX-ZTX8-0526-SM-59HLD 12.4
GTEX-13111-1426-SM-5DUW3 12.2
GTEX-13FTW-2026-SM-5IJE2 12.2
GTEX-WFG7-1726-SM-4LVME 12.1
GTEX-XXEK-1026-SM-4BRUW 11.9
GTEX-WFG8-1626-SM-4LVMB 11.3
GTEX-Y3IK-1726-SM-4YCCR 9.7
GTEX-XMK1-1826-SM-4B66F 9.2
GTEX-14DAR-1426-SM-5RQIR 9.1
GTEX-Y9LG-1626-SM-5IFHM 8.8
GTEX-12WSK-1526-SM-5CVNO 8.5
GTEX-ZPCL-1726-SM-57WEO 8.2
GTEX-1122O-1326-SM-5H11F 7.8
GTEX-ZF2S-1726-SM-57WFT 6.9
GTEX-117YX-0326-SM-5GICL 6.8
GTEX-1192X-2526-SM-59868 5.6
GTEX-111CU-1326-SM-5NQ8L 5.4
GTEX-13OVI-1926-SM-5IJCG 4.2
GTEX-ZQUD-0926-SM-57WE3 3.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

80.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 80.7
FF:10024-101D6 15,40,85 years, mixed 80.7

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The Human Protein Atlas project is funded
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