We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RNASET2
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:284.2TPM
GTEx:80.1RPKM
FANTOM5:226.3Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:High
Cells in white pulp:High
 

Antibody staining

Antibody HPA029013

 

Antibody HPA066509

 

Cells in red pulp

Low   High  

Cells in white pulp

Not detected   High  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

284.2

overview Female, age 60
Sample 1
TPM: 238.7
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 303.5
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 238.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 295.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 345.1
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

80.1

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 80.1
Samples: 104

Max RPKM: 119
Min RPKM: 32.5
Std RPKM: 16.7
Median RPKM: 81.6
GTEX-U4B1-0526-SM-4DXTK 119.0
GTEX-U3ZN-0126-SM-4DXUM 110.1
GTEX-YEC4-0126-SM-4W21T 110.1
GTEX-ZDTT-1026-SM-5KM19 108.7
GTEX-11LCK-0126-SM-5A5M5 108.5
GTEX-QV31-0126-SM-447BP 107.0
GTEX-UJHI-0126-SM-4IHLP 105.0
GTEX-S3XE-0626-SM-4AD6B 104.5
GTEX-U3ZH-0126-SM-4DXUK 102.6
GTEX-ZVP2-0526-SM-51MSC 101.6
GTEX-11NSD-0426-SM-5N9CR 101.0
GTEX-12WSN-0126-SM-5DUX5 100.7
GTEX-P4QS-0926-SM-48TBS 98.4
GTEX-ZYFG-0726-SM-5GIDX 97.7
GTEX-XGQ4-0126-SM-4AT4H 96.0
GTEX-W5WG-0626-SM-4SOID 95.4
GTEX-S4Z8-0226-SM-4AD5K 95.1
GTEX-11EQ9-0426-SM-5A5JY 95.0
GTEX-PLZ6-0126-SM-48TC6 94.8
GTEX-XQ8I-1726-SM-4BOQB 94.7
GTEX-13X6H-0726-SM-5Q5BX 94.6
GTEX-O5YT-0926-SM-48TDG 94.2
GTEX-Y3I4-0126-SM-4TT26 94.0
GTEX-147F3-0126-SM-5NQBJ 93.3
GTEX-X3Y1-0126-SM-4PQZA 93.2
GTEX-14E6E-1226-SM-5S2R5 92.4
GTEX-13N11-0126-SM-5KM2Z 92.1
GTEX-Q2AH-0226-SM-48U1I 92.1
GTEX-Y8LW-0126-SM-4VBS1 92.0
GTEX-WFON-0126-SM-4LVM9 90.9
GTEX-RUSQ-0126-SM-47JWV 89.9
GTEX-X4LF-0226-SM-4QAS8 89.6
GTEX-13111-0126-SM-5EGHO 89.5
GTEX-T5JW-0126-SM-4DM6K 89.5
GTEX-YB5K-1926-SM-4VDT4 89.5
GTEX-13PL7-1126-SM-5MR5O 89.2
GTEX-ZV6S-0826-SM-5NQ6Z 88.6
GTEX-13PVR-0326-SM-5RQJY 87.4
GTEX-12WSJ-0526-SM-5GCOZ 87.2
GTEX-14DAR-0326-SM-5S2PS 87.2
GTEX-QDVN-0526-SM-48TZ4 86.5
GTEX-ZAB5-0526-SM-5CVMU 86.4
GTEX-146FQ-0626-SM-5LU9U 86.1
GTEX-145MN-0126-SM-5RQHY 85.9
GTEX-Z9EW-0726-SM-5HL9H 85.9
GTEX-144GN-2126-SM-5O99D 84.9
GTEX-ZYWO-0226-SM-5GZX3 83.7
GTEX-Q734-0226-SM-48U1A 83.4
GTEX-UPK5-1626-SM-4JBHI 83.0
GTEX-146FR-1926-SM-5NQA6 82.2
GTEX-QV44-0126-SM-4R1KH 81.9
GTEX-ZVZP-0726-SM-59HKA 81.7
GTEX-QLQW-0126-SM-447BK 81.6
GTEX-PW2O-0126-SM-48TC8 81.2
GTEX-ZLFU-0526-SM-4WWBN 80.8
GTEX-132QS-0226-SM-5IFFZ 80.6
GTEX-11P81-1326-SM-5GU5S 80.3
GTEX-13CF3-0226-SM-5J1NW 79.5
GTEX-XAJ8-0126-SM-47JYG 79.4
GTEX-11DXX-0726-SM-5H12X 78.9
GTEX-13VXT-1326-SM-5LU3Y 77.8
GTEX-QCQG-0226-SM-48U28 77.6
GTEX-OIZH-0926-SM-48TBR 76.9
GTEX-XMK1-0126-SM-4B65F 76.8
GTEX-QMRM-0226-SM-4R1K7 76.0
GTEX-Y5LM-0326-SM-4VBRN 75.5
GTEX-139T6-0226-SM-5IFGZ 75.3
GTEX-WHWD-0126-SM-4OORS 74.4
GTEX-139YR-0426-SM-5IFFV 73.5
GTEX-11XUK-0426-SM-5EQML 72.7
GTEX-OOBJ-0926-SM-48TDO 72.0
GTEX-R55G-0226-SM-48FEI 71.5
GTEX-YFCO-0926-SM-5LUA5 69.7
GTEX-117YX-2126-SM-5GIEL 69.6
GTEX-ZZPU-0126-SM-5E446 69.6
GTEX-1122O-0526-SM-5N9DM 69.4
GTEX-VJYA-0126-SM-4KL1P 69.4
GTEX-12BJ1-0726-SM-5EGGF 69.3
GTEX-1211K-0426-SM-5FQTP 68.8
GTEX-1399R-0226-SM-5IJGG 68.6
GTEX-POMQ-0126-SM-48TD6 67.4
GTEX-XUJ4-0226-SM-4BOP8 67.4
GTEX-ZPU1-1026-SM-4YCEQ 64.9
GTEX-ZLWG-0426-SM-4WWFA 63.7
GTEX-P4PP-0926-SM-48TBZ 62.4
GTEX-XV7Q-0126-SM-4BRVK 62.0
GTEX-13U4I-1626-SM-5IFFR 61.8
GTEX-XXEK-0126-SM-4BRVU 60.1
GTEX-XPVG-0626-SM-4B65B 60.0
GTEX-13FH7-1326-SM-5IFG8 59.7
GTEX-PX3G-0926-SM-48U12 59.2
GTEX-11VI4-0126-SM-5GU6Z 58.8
GTEX-13S86-0126-SM-5S2PI 57.5
GTEX-ZP4G-0326-SM-4YCEF 57.5
GTEX-131XG-0426-SM-5IFGD 57.0
GTEX-1399S-0226-SM-5IFFG 56.2
GTEX-12WSK-0126-SM-5GCO7 53.6
GTEX-131XE-1126-SM-5EGHW 53.4
GTEX-Y3IK-0126-SM-4WWE9 52.5
GTEX-11P7K-0426-SM-5BC5H 52.3
GTEX-YB5E-0426-SM-5IFHR 50.5
GTEX-X585-1826-SM-4QAS3 47.1
GTEX-Y114-0726-SM-4TT6U 45.8
GTEX-12WSG-0926-SM-5EGIH 32.5
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

226.3

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 226.3
FF:10025-101D7 39,50,70 years, male 226.3

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.