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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:112.4TPM
GTEx:51.5RPKM
FANTOM5:234.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA063871

 

Glandular cells

Not detected  
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

112.4

overview Male, age 65
Sample 1
TPM: 87.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 102.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 115.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 144.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

51.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 51.5
Samples: 88

Max RPKM: 97.7
Min RPKM: 19.7
Std RPKM: 13.5
Median RPKM: 52.1
GTEX-ZVT2-2126-SM-5NQ93 97.7
GTEX-13FTW-2026-SM-5IJE2 81.1
GTEX-1399U-2126-SM-5IFEZ 76.4
GTEX-ZVP2-1726-SM-5GU5P 75.1
GTEX-XXEK-1026-SM-4BRUW 73.3
GTEX-ZZ64-0526-SM-5GZXM 71.2
GTEX-11P7K-1626-SM-5GU63 70.6
GTEX-Z9EW-0926-SM-5CVMM 69.9
GTEX-14DAR-1426-SM-5RQIR 68.3
GTEX-ZPIC-2326-SM-57WDW 68.1
GTEX-ZVZP-1826-SM-5GZXB 67.7
GTEX-145LT-1026-SM-5LU9O 66.7
GTEX-YEC4-1726-SM-4W21E 66.2
GTEX-XBED-1426-SM-4AT4G 65.7
GTEX-ZXES-1526-SM-5NQ95 63.8
GTEX-11DXX-1626-SM-5H11H 62.9
GTEX-WRHK-1026-SM-4MVOD 62.9
GTEX-ZYFG-2026-SM-5E43Y 62.7
GTEX-ZTX8-0526-SM-59HLD 62.1
GTEX-WFJO-0926-SM-4LVM2 60.7
GTEX-1399S-2026-SM-5KM4B 60.6
GTEX-11P82-0826-SM-5P9GU 60.6
GTEX-ZLV1-1126-SM-4WWBW 59.2
GTEX-ZPCL-1726-SM-57WEO 59.2
GTEX-13FH7-1226-SM-5IJFK 59.1
GTEX-13CF3-1226-SM-5LZXN 58.3
GTEX-13D11-0726-SM-5LZZB 58.3
GTEX-11EQ9-1326-SM-5985X 57.4
GTEX-YB5E-1526-SM-5IFIE 56.7
GTEX-14E6E-1626-SM-5RQI7 56.7
GTEX-145ME-0926-SM-5O9AR 56.1
GTEX-XGQ4-1326-SM-4GIDU 55.8
GTEX-13113-1226-SM-5EGHT 55.5
GTEX-12BJ1-1926-SM-5HL9Z 54.4
GTEX-13PL7-2626-SM-5IFH4 54.2
GTEX-11XUK-1426-SM-5EQMG 54.0
GTEX-13O21-1026-SM-5IJDU 53.7
GTEX-ZQG8-2526-SM-57WEQ 53.5
GTEX-139T6-1026-SM-5IJGC 53.5
GTEX-X5EB-1626-SM-4E3IV 53.3
GTEX-ZYWO-1526-SM-5SIAL 52.6
GTEX-1122O-1326-SM-5H11F 52.4
GTEX-WH7G-1626-SM-4LVMY 52.3
GTEX-Y9LG-1626-SM-5IFHM 52.2
GTEX-13RTK-0826-SM-5Q5C6 52.0
GTEX-131XG-1726-SM-5LZUR 51.9
GTEX-ZA64-1226-SM-5HL7B 51.4
GTEX-XAJ8-0526-SM-47JYK 50.0
GTEX-11NSD-1726-SM-5N9C3 50.0
GTEX-ZLFU-1526-SM-4WWBT 49.9
GTEX-13O61-1326-SM-5KM31 47.9
GTEX-13QBU-1926-SM-5IJEW 47.6
GTEX-148VJ-2226-SM-5NQ9M 47.5
GTEX-XUZC-1426-SM-4BRV3 47.0
GTEX-131XF-1326-SM-5GCMQ 46.8
GTEX-ZTPG-2626-SM-57WFX 46.4
GTEX-11I78-1126-SM-5A5K5 46.4
GTEX-ZTSS-0926-SM-59865 46.2
GTEX-111YS-1426-SM-5GID8 46.2
GTEX-11VI4-1626-SM-5EQKO 45.6
GTEX-Y114-1426-SM-4TT6W 45.1
GTEX-X15G-1426-SM-4PQZK 44.9
GTEX-WFG8-1626-SM-4LVMB 44.5
GTEX-133LE-1426-SM-5IFH1 44.0
GTEX-139YR-2226-SM-5IFFW 43.7
GTEX-YF7O-1826-SM-5IFIU 43.6
GTEX-ZP4G-1626-SM-57WGD 43.2
GTEX-12WSK-1526-SM-5CVNO 42.8
GTEX-1192X-2526-SM-59868 41.4
GTEX-111CU-1326-SM-5NQ8L 40.9
GTEX-VUSG-1726-SM-4KKZL 39.0
GTEX-Y5LM-1626-SM-4VDTB 39.0
GTEX-11DXZ-1326-SM-5H11X 38.9
GTEX-WFG7-1726-SM-4LVME 38.2
GTEX-UPK5-2026-SM-4JBIM 37.6
GTEX-WQUQ-2426-SM-4MVNW 36.7
GTEX-13OVI-1926-SM-5IJCG 36.1
GTEX-VJYA-0926-SM-4KL1N 34.6
GTEX-ZEX8-1826-SM-57WBH 34.1
GTEX-1399R-2026-SM-5K7WN 33.2
GTEX-117YX-0326-SM-5GICL 33.1
GTEX-ZQUD-0926-SM-57WE3 32.7
GTEX-ZC5H-2326-SM-4WAYT 31.3
GTEX-WEY5-1526-SM-4LMJF 29.9
GTEX-13111-1426-SM-5DUW3 27.5
GTEX-Y3IK-1726-SM-4YCCR 27.4
GTEX-ZF2S-1726-SM-57WFT 23.8
GTEX-XMK1-1826-SM-4B66F 19.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

234.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 234.9
FF:10024-101D6 15,40,85 years, mixed 234.9

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