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SNX1
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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:37.0TPM
GTEx:10.0RPKM
FANTOM5:106.9Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Low
 

Antibody staining

Antibody HPA047373

 

Bile duct cells

Not detected  

Hepatocytes

Low  
 
 
 

LIVER - HPA RNA-seq

Average TPM

37.0

N/A Female, age 60
Sample 1
TPM: 35.4
overview Male, age 54
Sample 2
TPM: 36.9
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 32.5
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 37.0
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 26.4
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 43.8
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 39.3
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 30.2
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 31.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 57.1
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

10.0

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 10.0
Samples: 119

Max RPKM: 16.3
Min RPKM: 5.8
Std RPKM: 1.8
Median RPKM: 10
GTEX-1399T-0826-SM-5IFES 16.3
GTEX-11NUK-1226-SM-5P9GM 14.4
GTEX-13NZ9-1326-SM-5MR3V 13.9
GTEX-11ZUS-2526-SM-59872 13.7
GTEX-S33H-1626-SM-4AD68 13.7
GTEX-ZVT3-1626-SM-5GU66 13.4
GTEX-13VXU-0926-SM-5IFFH 13.3
GTEX-11OF3-0726-SM-5BC4Z 13.2
GTEX-QEG4-1826-SM-4R1JN 13.2
GTEX-145LU-1326-SM-5LU9N 12.8
GTEX-RN64-1826-SM-48FDV 12.6
GTEX-147F4-1426-SM-5LUA8 12.5
GTEX-13OW6-2626-SM-5IFF2 12.1
GTEX-13SLX-1226-SM-5S2Q6 12.1
GTEX-QEL4-1226-SM-447A4 12.1
GTEX-11DXY-0526-SM-5EGGQ 12.0
GTEX-12WSM-0726-SM-5GCOW 11.9
GTEX-11EQ9-0526-SM-5A5JZ 11.6
GTEX-14A5I-1726-SM-5QGQ5 11.5
GTEX-XBEC-1526-SM-4AT68 11.5
GTEX-ZPU1-0826-SM-57WG2 11.5
GTEX-WZTO-0626-SM-4PQYY 11.4
GTEX-11WQC-0726-SM-5EQMR 11.3
GTEX-UTHO-2426-SM-4JBHD 11.3
GTEX-13N11-0926-SM-5IJG2 11.2
GTEX-13NYB-1026-SM-5IFH3 11.2
GTEX-X4EO-1126-SM-4QARQ 11.2
GTEX-11NV4-1326-SM-5HL6V 11.1
GTEX-Y5LM-0426-SM-4VBRO 11.1
GTEX-11ZVC-0726-SM-5FQT9 11.0
GTEX-SJXC-1226-SM-4DM78 11.0
GTEX-T6MN-1226-SM-3NMA5 11.0
GTEX-146FH-1526-SM-5NQBU 10.9
GTEX-YB5E-0326-SM-5IFHU 10.9
GTEX-YECK-1926-SM-4W21H 10.9
GTEX-131YS-1626-SM-5HL6C 10.8
GTEX-P78B-1326-SM-3P611 10.8
GTEX-12WSI-0226-SM-5GCNA 10.7
GTEX-Q2AG-1126-SM-48U1P 10.7
GTEX-S32W-1926-SM-4AD63 10.7
GTEX-WYVS-1926-SM-4PQZ2 10.7
GTEX-YFC4-1526-SM-5IFJS 10.7
GTEX-13112-1426-SM-5EGH8 10.6
GTEX-Q734-0326-SM-48U15 10.6
GTEX-13N2G-0926-SM-5IFGJ 10.5
GTEX-14AS3-0126-SM-5Q5F4 10.5
GTEX-UPIC-0926-SM-4IHLV 10.5
GTEX-PX3G-0826-SM-48TZS 10.4
GTEX-11DXZ-0126-SM-5EGGY 10.3
GTEX-1212Z-0226-SM-59HLF 10.3
GTEX-13NZB-0626-SM-5IFH6 10.3
GTEX-X261-1726-SM-4PQYT 10.3
GTEX-13113-1326-SM-5GCOI 10.2
GTEX-139YR-0226-SM-5IFEM 10.2
GTEX-RNOR-1426-SM-48FDJ 10.2
GTEX-ZAB5-0426-SM-5CVMI 10.2
GTEX-1269C-0626-SM-5FQSS 10.1
GTEX-139TS-1426-SM-5IFJD 10.1
GTEX-WQUQ-1926-SM-4OOSA 10.0
GTEX-X4EP-1026-SM-4QAS5 10.0
GTEX-XOTO-0826-SM-4B65O 10.0
GTEX-ZTPG-1426-SM-51MT3 10.0
GTEX-11ZTS-1426-SM-5EQMM 9.9
GTEX-QV44-0326-SM-4R1KD 9.9
GTEX-13FTZ-0726-SM-5IFFY 9.8
GTEX-ZZPU-0426-SM-5GZYH 9.8
GTEX-139TU-0826-SM-5IJFG 9.7
GTEX-13FTW-1126-SM-5J2NV 9.7
GTEX-R53T-0326-SM-48FEC 9.7
GTEX-S4Z8-0526-SM-4AD4T 9.7
GTEX-U3ZN-0226-SM-3DB8D 9.7
GTEX-1497J-0726-SM-5Q5D1 9.6
GTEX-OOBJ-0826-SM-3NB2K 9.5
GTEX-Y5V5-0926-SM-4VBPZ 9.5
GTEX-12KS4-1326-SM-5LUB3 9.4
GTEX-14DAQ-1726-SM-5S2R2 9.4
GTEX-12696-0826-SM-5EGGE 9.3
GTEX-RM2N-1926-SM-48FCU 9.3
GTEX-1399R-1226-SM-5P9GF 9.2
GTEX-145MF-0826-SM-5QGQA 9.0
GTEX-QESD-2026-SM-447BI 9.0
GTEX-X3Y1-2726-SM-4PQZH 9.0
GTEX-12WSG-0626-SM-5FQTQ 8.9
GTEX-UPK5-1426-SM-4JBHH 8.9
GTEX-WFON-1726-SM-4LVMQ 8.9
GTEX-YEC4-0826-SM-5P9FV 8.9
GTEX-ZF2S-3026-SM-4WWCH 8.9
GTEX-13O3O-1826-SM-5IFGW 8.8
GTEX-ZVP2-0626-SM-51MSO 8.8
GTEX-13FLV-0326-SM-5N9DJ 8.7
GTEX-144GM-1326-SM-5LU5E 8.7
GTEX-12WSL-0226-SM-5CVMJ 8.6
GTEX-147JS-1126-SM-5RQIW 8.6
GTEX-TKQ2-1726-SM-4DXUP 8.6
GTEX-VUSG-0126-SM-4KL1X 8.6
GTEX-131XH-0626-SM-5LZWH 8.5
GTEX-RU72-1426-SM-46MUF 8.5
GTEX-14E1K-0326-SM-5S2PE 8.4
GTEX-X4XY-1626-SM-46MVN 8.4
GTEX-ZVT4-0626-SM-5E45T 8.4
GTEX-ZYY3-0626-SM-5NQ6W 8.4
GTEX-ZAB4-0826-SM-5LU9D 8.3
GTEX-ZF29-2026-SM-4WWB7 8.3
GTEX-13QJC-0726-SM-5RQJK 8.2
GTEX-ZYT6-0626-SM-5E45V 8.2
GTEX-RWSA-1426-SM-47JXA 8.0
GTEX-Z9EW-0426-SM-5CVM9 8.0
GTEX-QDVN-0826-SM-48TZ2 7.8
GTEX-131XE-0326-SM-5LZVO 7.7
GTEX-132NY-0926-SM-5P9G3 7.5
GTEX-REY6-1226-SM-48FDR 7.3
GTEX-RTLS-1326-SM-46MUN 7.3
GTEX-145MO-2326-SM-5NQ9K 7.2
GTEX-14C38-1526-SM-5RQJ7 6.9
GTEX-11GSP-0626-SM-5986T 6.8
GTEX-12WSD-1426-SM-5GCN9 6.7
GTEX-13PVR-0126-SM-5S2PY 6.7
GTEX-14753-1626-SM-5NQ9L 6.3
GTEX-12ZZZ-1326-SM-59HKW 5.8
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

106.9

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 106.9
FF:10018-101C9 64,69,70 years, mixed 106.9

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