We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SNX1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:76.4TPM
GTEx:21.5RPKM
FANTOM5:111.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA047373

 

Glandular cells

Medium  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

76.4

overview Male, age 62
Sample 1
TPM: 52.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 71.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 65.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 111.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 76.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 94.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 77.7
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 91.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 58.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

21.5

GTEx sample id

RPKM

18.320.924.113.930.305101520253035
 
18.320.924.113.930.305101520253035

Prostate

Prostate
RPKM: 21.5
Samples: 106

Max RPKM: 36.9
Min RPKM: 13.9
Std RPKM: 4.4
Median RPKM: 20.9
GTEX-ZY6K-1526-SM-5GZXE 36.9
GTEX-X5EB-1826-SM-4E3K8 36.1
GTEX-S33H-1826-SM-4AD65 34.8
GTEX-U4B1-1426-SM-4DXTX 30.3
GTEX-117YX-1526-SM-5H12T 29.5
GTEX-13FTW-1226-SM-5LZZ1 29.3
GTEX-Y9LG-1826-SM-4VBQC 28.5
GTEX-11TUW-2126-SM-5GU7B 28.2
GTEX-SNOS-1026-SM-4DM4Y 28.1
GTEX-WH7G-1726-SM-4LVKY 27.7
GTEX-WOFM-0326-SM-4OOSL 27.1
GTEX-WFG7-1826-SM-3GIL1 26.8
GTEX-ZT9W-1626-SM-4YCDQ 26.8
GTEX-11WQK-2726-SM-5EQMU 26.6
GTEX-Q2AI-1126-SM-48U19 26.2
GTEX-YJ8A-1126-SM-5IFJU 25.8
GTEX-132QS-1126-SM-5P9GC 25.5
GTEX-S4Q7-1026-SM-4AD75 25.5
GTEX-12C56-1326-SM-5FQSV 25.2
GTEX-14E6E-1126-SM-5S2R4 25.1
GTEX-YB5E-1826-SM-5IFI4 25.0
GTEX-S3XE-1326-SM-4AD4H 24.6
GTEX-U3ZM-0926-SM-4DXSW 24.6
GTEX-11P82-1126-SM-5BC5K 24.3
GTEX-S95S-1026-SM-4B64M 24.2
GTEX-11TT1-2026-SM-5EQM8 24.1
GTEX-VJYA-1226-SM-3GIJ6 24.1
GTEX-ZDYS-1226-SM-5IJF3 24.1
GTEX-QMRM-1426-SM-4R1K8 23.6
GTEX-XPVG-2026-SM-4B65E 23.6
GTEX-ZZ64-0926-SM-5E44L 23.6
GTEX-XMK1-1026-SM-4B65H 23.4
GTEX-13FHO-2826-SM-5K7ZA 23.3
GTEX-REY6-2126-SM-48FD9 23.2
GTEX-12BJ1-1226-SM-5LUAE 23.1
GTEX-OIZH-2026-SM-3NB1M 22.9
GTEX-QV31-1026-SM-4R1K3 22.9
GTEX-11NSD-0826-SM-5986S 22.5
GTEX-145LT-0626-SM-5O99E 22.5
GTEX-13O61-1726-SM-5KM46 22.4
GTEX-U412-2026-SM-4DXSI 22.3
GTEX-ZTX8-1026-SM-5EGHD 22.3
GTEX-144GM-0826-SM-5O98R 22.2
GTEX-ZTTD-2726-SM-57WFA 22.1
GTEX-PLZ6-1126-SM-3P5ZR 21.9
GTEX-YF7O-1926-SM-4W1YQ 21.9
GTEX-V1D1-1926-SM-4JBGX 21.8
GTEX-OOBJ-2026-SM-3NB1R 21.7
GTEX-11P7K-0626-SM-5985Z 21.6
GTEX-ZUA1-2826-SM-59HLE 21.4
GTEX-ZPU1-2026-SM-57WFI 21.3
GTEX-V955-1826-SM-4JBIL 21.1
GTEX-WFG8-1826-SM-4LVM4 21.1
GTEX-ZVP2-0826-SM-59HJ6 20.7
GTEX-139T6-1526-SM-5P9G6 20.6
GTEX-148VJ-1826-SM-5Q5DV 20.6
GTEX-RM2N-1126-SM-48FCY 20.4
GTEX-145LV-1226-SM-5S2QH 20.2
GTEX-WFON-1626-SM-4LVMV 20.1
GTEX-11EQ9-1726-SM-5HL6U 20.0
GTEX-1399R-0526-SM-5IJEF 19.9
GTEX-QLQ7-1326-SM-4R1JY 19.8
GTEX-XGQ4-1826-SM-4AT6F 19.8
GTEX-111YS-1726-SM-5GIED 19.7
GTEX-146FQ-1726-SM-5QGPX 19.6
GTEX-RWSA-2026-SM-47JX8 19.6
GTEX-111CU-1526-SM-5N9FS 19.3
GTEX-Y8E4-2126-SM-5RQHO 19.3
GTEX-12696-2226-SM-5EQ65 19.1
GTEX-11O72-2726-SM-5HL6K 19.0
GTEX-11DYG-2526-SM-5N9BB 18.9
GTEX-T8EM-1826-SM-4DM7F 18.9
GTEX-XQ3S-2526-SM-4BOOG 18.8
GTEX-1399T-1226-SM-5P9J5 18.7
GTEX-SNMC-0926-SM-4DM5U 18.7
GTEX-XAJ8-0626-SM-47JY4 18.6
GTEX-13N2G-1826-SM-5KM1I 18.5
GTEX-14ABY-0726-SM-5Q5DF 18.5
GTEX-XOTO-2826-SM-4B65I 18.4
GTEX-117YW-1426-SM-5EGGO 18.3
GTEX-13O21-1126-SM-5N9EV 18.3
GTEX-OOBK-2025-SM-3LK5S 18.0
GTEX-U8XE-2526-SM-4E3IT 18.0
GTEX-WZTO-0926-SM-4PQZ3 17.9
GTEX-11ZUS-2126-SM-5N9E6 17.8
GTEX-131XF-1926-SM-5DUW4 17.8
GTEX-QV44-1526-SM-4R1KI 17.7
GTEX-14BMV-2326-SM-5RQJ4 17.5
GTEX-111FC-2026-SM-5GZYO 17.4
GTEX-13G51-2326-SM-5LZXV 17.4
GTEX-12ZZZ-2026-SM-5LZWJ 17.3
GTEX-ZLFU-1726-SM-4WWBU 17.2
GTEX-UTHO-2726-SM-4JBH9 17.1
GTEX-NPJ8-2426-SM-3MJHL 16.9
GTEX-WK11-2626-SM-4OOSK 16.9
GTEX-13OW8-0426-SM-5J2NR 16.6
GTEX-QEG4-2226-SM-4R1JM 16.6
GTEX-SJXC-2026-SM-4DM6N 16.6
GTEX-13NYS-1026-SM-5KLZT 16.1
GTEX-11OF3-1726-SM-5GU5Q 15.9
GTEX-132NY-2826-SM-5P9G2 15.7
GTEX-13111-1326-SM-5GCNO 15.5
GTEX-14C5O-2826-SM-5RQI6 15.4
GTEX-13FXS-2826-SM-5LZYC 14.7
GTEX-NFK9-2226-SM-3MJGP 14.1
GTEX-13RTJ-2126-SM-5S2PZ 13.9
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

111.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 111.4
FF:10022-101D4 73,79,93 years, male 111.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.