We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SNX1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:76.3TPM
GTEx:19.7RPKM
FANTOM5:112.8Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Not detected
Cells in white pulp:Not detected
 

Antibody staining

Antibody HPA047373

 

Cells in red pulp

Not detected  

Cells in white pulp

Not detected  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

76.3

overview Female, age 60
Sample 1
TPM: 64.2
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 90.8
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 68.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 72.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 85.7
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

19.7

GTEx sample id

RPKM

18.619.820.815.723.30246810121416182022
 
18.619.820.815.723.30246810121416182022

Spleen

Spleen
RPKM: 19.7
Samples: 104

Max RPKM: 23.3
Min RPKM: 13.5
Std RPKM: 1.7
Median RPKM: 19.8
GTEX-UJHI-0126-SM-4IHLP 23.3
GTEX-131XG-0426-SM-5IFGD 23.1
GTEX-11EQ9-0426-SM-5A5JY 23.0
GTEX-1211K-0426-SM-5FQTP 22.8
GTEX-WHWD-0126-SM-4OORS 22.8
GTEX-QMRM-0226-SM-4R1K7 22.7
GTEX-ZPU1-1026-SM-4YCEQ 22.7
GTEX-OOBJ-0926-SM-48TDO 22.4
GTEX-X3Y1-0126-SM-4PQZA 22.4
GTEX-XPVG-0626-SM-4B65B 22.2
GTEX-139T6-0226-SM-5IFGZ 22.1
GTEX-13S86-0126-SM-5S2PI 21.9
GTEX-W5WG-0626-SM-4SOID 21.7
GTEX-YB5E-0426-SM-5IFHR 21.6
GTEX-ZVZP-0726-SM-59HKA 21.6
GTEX-ZYWO-0226-SM-5GZX3 21.5
GTEX-ZP4G-0326-SM-4YCEF 21.3
GTEX-13FH7-1326-SM-5IFG8 21.2
GTEX-12WSN-0126-SM-5DUX5 21.1
GTEX-VJYA-0126-SM-4KL1P 21.1
GTEX-P4QS-0926-SM-48TBS 21.0
GTEX-131XE-1126-SM-5EGHW 20.9
GTEX-1122O-0526-SM-5N9DM 20.8
GTEX-12BJ1-0726-SM-5EGGF 20.8
GTEX-12WSG-0926-SM-5EGIH 20.8
GTEX-12WSJ-0526-SM-5GCOZ 20.8
GTEX-13PVR-0326-SM-5RQJY 20.8
GTEX-ZLWG-0426-SM-4WWFA 20.8
GTEX-U4B1-0526-SM-4DXTK 20.7
GTEX-YB5K-1926-SM-4VDT4 20.7
GTEX-XV7Q-0126-SM-4BRVK 20.6
GTEX-Y5LM-0326-SM-4VBRN 20.6
GTEX-11DXX-0726-SM-5H12X 20.5
GTEX-11LCK-0126-SM-5A5M5 20.5
GTEX-1399S-0226-SM-5IFFG 20.4
GTEX-11P7K-0426-SM-5BC5H 20.3
GTEX-144GN-2126-SM-5O99D 20.3
GTEX-14DAR-0326-SM-5S2PS 20.3
GTEX-ZDTT-1026-SM-5KM19 20.3
GTEX-ZV6S-0826-SM-5NQ6Z 20.3
GTEX-ZZPU-0126-SM-5E446 20.3
GTEX-13PL7-1126-SM-5MR5O 20.2
GTEX-PLZ6-0126-SM-48TC6 20.2
GTEX-U3ZN-0126-SM-4DXUM 20.2
GTEX-YFCO-0926-SM-5LUA5 20.2
GTEX-11NSD-0426-SM-5N9CR 20.1
GTEX-XMK1-0126-SM-4B65F 20.1
GTEX-ZYFG-0726-SM-5GIDX 20.1
GTEX-11P81-1326-SM-5GU5S 20.0
GTEX-RUSQ-0126-SM-47JWV 20.0
GTEX-ZAB5-0526-SM-5CVMU 20.0
GTEX-146FR-1926-SM-5NQA6 19.8
GTEX-U3ZH-0126-SM-4DXUK 19.8
GTEX-Z9EW-0726-SM-5HL9H 19.8
GTEX-QV31-0126-SM-447BP 19.7
GTEX-S4Z8-0226-SM-4AD5K 19.7
GTEX-13VXT-1326-SM-5LU3Y 19.6
GTEX-145MN-0126-SM-5RQHY 19.6
GTEX-147F3-0126-SM-5NQBJ 19.6
GTEX-T5JW-0126-SM-4DM6K 19.6
GTEX-11VI4-0126-SM-5GU6Z 19.5
GTEX-13CF3-0226-SM-5J1NW 19.4
GTEX-Q2AH-0226-SM-48U1I 19.4
GTEX-P4PP-0926-SM-48TBZ 19.3
GTEX-QDVN-0526-SM-48TZ4 19.3
GTEX-13111-0126-SM-5EGHO 19.1
GTEX-R55G-0226-SM-48FEI 19.1
GTEX-Y3I4-0126-SM-4TT26 19.1
GTEX-ZLFU-0526-SM-4WWBN 19.0
GTEX-117YX-2126-SM-5GIEL 18.9
GTEX-139YR-0426-SM-5IFFV 18.9
GTEX-132QS-0226-SM-5IFFZ 18.8
GTEX-13X6H-0726-SM-5Q5BX 18.8
GTEX-Y8LW-0126-SM-4VBS1 18.8
GTEX-OIZH-0926-SM-48TBR 18.7
GTEX-POMQ-0126-SM-48TD6 18.7
GTEX-11XUK-0426-SM-5EQML 18.6
GTEX-XQ8I-1726-SM-4BOQB 18.6
GTEX-XXEK-0126-SM-4BRVU 18.6
GTEX-13N11-0126-SM-5KM2Z 18.5
GTEX-O5YT-0926-SM-48TDG 18.5
GTEX-X4LF-0226-SM-4QAS8 18.5
GTEX-XGQ4-0126-SM-4AT4H 18.5
GTEX-14E6E-1226-SM-5S2R5 18.4
GTEX-ZVP2-0526-SM-51MSC 18.4
GTEX-1399R-0226-SM-5IJGG 18.3
GTEX-PW2O-0126-SM-48TC8 18.1
GTEX-YEC4-0126-SM-4W21T 18.0
GTEX-146FQ-0626-SM-5LU9U 17.9
GTEX-XUJ4-0226-SM-4BOP8 17.8
GTEX-12WSK-0126-SM-5GCO7 17.6
GTEX-XAJ8-0126-SM-47JYG 17.6
GTEX-Q734-0226-SM-48U1A 17.5
GTEX-WFON-0126-SM-4LVM9 17.4
GTEX-QCQG-0226-SM-48U28 17.3
GTEX-QLQW-0126-SM-447BK 17.3
GTEX-S3XE-0626-SM-4AD6B 17.2
GTEX-UPK5-1626-SM-4JBHI 17.1
GTEX-13U4I-1626-SM-5IFFR 17.0
GTEX-QV44-0126-SM-4R1KH 16.9
GTEX-Y114-0726-SM-4TT6U 16.9
GTEX-X585-1826-SM-4QAS3 16.2
GTEX-PX3G-0926-SM-48U12 15.7
GTEX-Y3IK-0126-SM-4WWE9 13.5
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

112.8

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 112.8
FF:10025-101D7 39,50,70 years, male 112.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.