We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ATP6V0A1
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:27.1TPM
GTEx:18.3RPKM
FANTOM5:98.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA022144

 

Glandular cells

High  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

27.1

overview Male, age 65
Sample 1
TPM: 33.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 26.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 23.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 24.6

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

18.3

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 18.3
Samples: 88

Max RPKM: 29.1
Min RPKM: 11.2
Std RPKM: 3.7
Median RPKM: 18
GTEX-YF7O-1826-SM-5IFIU 29.1
GTEX-1399S-2026-SM-5KM4B 27.3
GTEX-1122O-1326-SM-5H11F 26.4
GTEX-VJYA-0926-SM-4KL1N 24.8
GTEX-11I78-1126-SM-5A5K5 24.8
GTEX-ZTSS-0926-SM-59865 24.4
GTEX-ZPCL-1726-SM-57WEO 23.2
GTEX-ZZ64-0526-SM-5GZXM 22.9
GTEX-ZLV1-1126-SM-4WWBW 22.5
GTEX-ZTX8-0526-SM-59HLD 22.4
GTEX-YEC4-1726-SM-4W21E 22.3
GTEX-Y9LG-1626-SM-5IFHM 22.3
GTEX-YB5E-1526-SM-5IFIE 22.2
GTEX-ZYFG-2026-SM-5E43Y 22.2
GTEX-13D11-0726-SM-5LZZB 22.2
GTEX-14DAR-1426-SM-5RQIR 22.1
GTEX-11EQ9-1326-SM-5985X 22.0
GTEX-111YS-1426-SM-5GID8 21.9
GTEX-ZA64-1226-SM-5HL7B 21.7
GTEX-14E6E-1626-SM-5RQI7 21.6
GTEX-ZVZP-1826-SM-5GZXB 21.6
GTEX-13PL7-2626-SM-5IFH4 21.5
GTEX-XUZC-1426-SM-4BRV3 21.3
GTEX-ZYWO-1526-SM-5SIAL 21.2
GTEX-11DXX-1626-SM-5H11H 21.0
GTEX-ZQUD-0926-SM-57WE3 20.9
GTEX-133LE-1426-SM-5IFH1 20.3
GTEX-WEY5-1526-SM-4LMJF 19.8
GTEX-ZTPG-2626-SM-57WFX 19.8
GTEX-13FH7-1226-SM-5IJFK 19.8
GTEX-ZXES-1526-SM-5NQ95 19.4
GTEX-13OVI-1926-SM-5IJCG 19.4
GTEX-11XUK-1426-SM-5EQMG 19.3
GTEX-11DXZ-1326-SM-5H11X 19.2
GTEX-ZF2S-1726-SM-57WFT 19.2
GTEX-ZLFU-1526-SM-4WWBT 19.1
GTEX-145LT-1026-SM-5LU9O 19.0
GTEX-13CF3-1226-SM-5LZXN 18.9
GTEX-117YX-0326-SM-5GICL 18.7
GTEX-11P7K-1626-SM-5GU63 18.7
GTEX-WQUQ-2426-SM-4MVNW 18.7
GTEX-11P82-0826-SM-5P9GU 18.2
GTEX-XGQ4-1326-SM-4GIDU 18.1
GTEX-XBED-1426-SM-4AT4G 18.1
GTEX-WFG7-1726-SM-4LVME 17.9
GTEX-ZC5H-2326-SM-4WAYT 17.8
GTEX-Y114-1426-SM-4TT6W 17.7
GTEX-131XF-1326-SM-5GCMQ 17.6
GTEX-ZEX8-1826-SM-57WBH 17.5
GTEX-XAJ8-0526-SM-47JYK 17.1
GTEX-X15G-1426-SM-4PQZK 16.9
GTEX-12BJ1-1926-SM-5HL9Z 16.9
GTEX-WH7G-1626-SM-4LVMY 16.8
GTEX-Y5LM-1626-SM-4VDTB 16.8
GTEX-WRHK-1026-SM-4MVOD 16.6
GTEX-WFG8-1626-SM-4LVMB 16.5
GTEX-13FTW-2026-SM-5IJE2 16.4
GTEX-11NSD-1726-SM-5N9C3 16.4
GTEX-139T6-1026-SM-5IJGC 16.4
GTEX-WFJO-0926-SM-4LVM2 16.4
GTEX-ZPIC-2326-SM-57WDW 16.3
GTEX-XXEK-1026-SM-4BRUW 16.2
GTEX-13O61-1326-SM-5KM31 16.1
GTEX-ZVP2-1726-SM-5GU5P 16.1
GTEX-Y3IK-1726-SM-4YCCR 16.0
GTEX-13111-1426-SM-5DUW3 16.0
GTEX-X5EB-1626-SM-4E3IV 15.8
GTEX-ZVT2-2126-SM-5NQ93 15.7
GTEX-13113-1226-SM-5EGHT 15.7
GTEX-1399R-2026-SM-5K7WN 15.2
GTEX-Z9EW-0926-SM-5CVMM 15.0
GTEX-111CU-1326-SM-5NQ8L 14.9
GTEX-13QBU-1926-SM-5IJEW 14.9
GTEX-13RTK-0826-SM-5Q5C6 14.5
GTEX-12WSK-1526-SM-5CVNO 14.2
GTEX-131XG-1726-SM-5LZUR 14.2
GTEX-1399U-2126-SM-5IFEZ 13.8
GTEX-1192X-2526-SM-59868 13.7
GTEX-139YR-2226-SM-5IFFW 13.7
GTEX-ZQG8-2526-SM-57WEQ 13.3
GTEX-XMK1-1826-SM-4B66F 13.1
GTEX-VUSG-1726-SM-4KKZL 13.1
GTEX-13O21-1026-SM-5IJDU 13.1
GTEX-11VI4-1626-SM-5EQKO 13.0
GTEX-ZP4G-1626-SM-57WGD 12.9
GTEX-UPK5-2026-SM-4JBIM 12.2
GTEX-145ME-0926-SM-5O9AR 11.4
GTEX-148VJ-2226-SM-5NQ9M 11.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

98.1

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 98.1
FF:10024-101D6 15,40,85 years, mixed 98.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.