Tissue expression of CDH1 - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	128.6	TPM
GTEx:	30.0	RPKM
FANTOM5:	421.4	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glandular cells:	High
Peripheral nerve/ganglion:	Not detected

Antibody staining	Antibody HPA004812	Antibody CAB000087	Antibody CAB028364	Antibody CAB072855	Antibody CAB072856	Antibody CAB072857
Endothelial cells	Not detected	Not detected	Not detected	Not detected	Not detected	Not detected
Glandular cells	High	High	High	High	High	High
Peripheral nerve/ganglion	Not detected	Not detected	Not detected

COLON - HPA RNA-seq

Average TPM	128.6

Male, age 54

Sample 1
TPM: 151.1

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 119.8

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 111.0

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 203.0

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 46.8

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 73.4

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 150.9

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 152.9

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 92.6

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 148.4

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 189.6

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 132.1

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 100.2

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	30.0

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.9

Samples: 149

Max RPKM: 16.7
Min RPKM: 0
Std RPKM: 2.1
Median RPKM: 0.2

GTEX-XBED-1726-SM-47JYO

16.7

GTEX-Y5LM-1426-SM-5RQJL

11.8

GTEX-YJ8A-1726-SM-5P9IQ

9.7

GTEX-V955-1726-SM-4JBHF

8.4

GTEX-YEC3-2026-SM-4WWFL

7.2

GTEX-11EQ9-1526-SM-5PNY7

6.0

GTEX-ZPCL-1626-SM-57WGC

5.4

GTEX-146FH-2426-SM-5Q5EW

4.2

Show all

Colon - Transverse

Colon - Transverse
RPKM: 52.2

Samples: 196

Max RPKM: 151.3
Min RPKM: 0
Std RPKM: 42.7
Median RPKM: 56.5

GTEX-14E6E-1526-SM-5RQIG

151.3

GTEX-131XG-1826-SM-5LZV4

150.0

GTEX-1122O-1526-SM-5N9CL

139.8

GTEX-ZYWO-1626-SM-5E44H

135.2

GTEX-Y5LM-1526-SM-4VDTA

135.1

GTEX-111CU-1426-SM-5GZYP

132.1

GTEX-ZVT2-1926-SM-5GU5T

130.8

GTEX-132AR-2726-SM-5PNVN

127.7

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	421.4

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 421.4

FF:10014-101C5

62,83,84 years, mixed

421.4