We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CDH1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:50.8TPM
GTEx:15.5RPKM
FANTOM5:294.6Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Medium
 

Antibody staining

Antibody HPA004812

 

Antibody CAB000087

 

Antibody CAB028364

 

Antibody CAB072855

 

Antibody CAB072856

 

Antibody CAB072857

 

Bile duct cells

Medium   Medium   Medium   High   High   Low  

Hepatocytes

Low   Medium   Medium   Low   Medium   Not detected  
           
           
           

LIVER - HPA RNA-seq

Average TPM

50.8

N/A Female, age 60
Sample 1
TPM: 69.2
overview Male, age 54
Sample 2
TPM: 42.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 73.2
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 39.3
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 22.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 56.7
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 50.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 32.8
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 35.8
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 85.6
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

15.5

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 15.5
Samples: 119

Max RPKM: 35.1
Min RPKM: 4.6
Std RPKM: 6.5
Median RPKM: 14.8
GTEX-QEG4-1826-SM-4R1JN 35.1
GTEX-12WSI-0226-SM-5GCNA 32.9
GTEX-1399T-0826-SM-5IFES 32.7
GTEX-YECK-1926-SM-4W21H 31.8
GTEX-11OF3-0726-SM-5BC4Z 29.9
GTEX-11EQ9-0526-SM-5A5JZ 28.6
GTEX-13SLX-1226-SM-5S2Q6 26.9
GTEX-13FTZ-0726-SM-5IFFY 26.5
GTEX-13VXU-0926-SM-5IFFH 26.3
GTEX-ZVT3-1626-SM-5GU66 25.1
GTEX-Y5LM-0426-SM-4VBRO 24.5
GTEX-1399R-1226-SM-5P9GF 24.0
GTEX-X4EP-1026-SM-4QAS5 23.6
GTEX-QESD-2026-SM-447BI 23.3
GTEX-11WQC-0726-SM-5EQMR 23.1
GTEX-13NYB-1026-SM-5IFH3 23.1
GTEX-139TU-0826-SM-5IJFG 23.0
GTEX-RN64-1826-SM-48FDV 22.7
GTEX-11DXY-0526-SM-5EGGQ 22.6
GTEX-Y5V5-0926-SM-4VBPZ 22.3
GTEX-1497J-0726-SM-5Q5D1 21.5
GTEX-147JS-1126-SM-5RQIW 21.4
GTEX-PX3G-0826-SM-48TZS 21.3
GTEX-11ZTS-1426-SM-5EQMM 21.2
GTEX-145MF-0826-SM-5QGQA 21.2
GTEX-14DAQ-1726-SM-5S2R2 20.5
GTEX-WZTO-0626-SM-4PQYY 20.1
GTEX-RTLS-1326-SM-46MUN 19.8
GTEX-11ZUS-2526-SM-59872 19.7
GTEX-12WSD-1426-SM-5GCN9 19.6
GTEX-T6MN-1226-SM-3NMA5 19.4
GTEX-ZVP2-0626-SM-51MSO 19.2
GTEX-1212Z-0226-SM-59HLF 19.1
GTEX-SJXC-1226-SM-4DM78 19.1
GTEX-YB5E-0326-SM-5IFHU 18.8
GTEX-14AS3-0126-SM-5Q5F4 18.5
GTEX-Q2AG-1126-SM-48U1P 18.3
GTEX-ZF2S-3026-SM-4WWCH 18.2
GTEX-13N2G-0926-SM-5IFGJ 17.9
GTEX-RU72-1426-SM-46MUF 17.5
GTEX-132NY-0926-SM-5P9G3 17.4
GTEX-11NV4-1326-SM-5HL6V 17.3
GTEX-147F4-1426-SM-5LUA8 17.0
GTEX-13FLV-0326-SM-5N9DJ 16.9
GTEX-QV44-0326-SM-4R1KD 16.9
GTEX-XOTO-0826-SM-4B65O 16.9
GTEX-ZPU1-0826-SM-57WG2 16.8
GTEX-ZZPU-0426-SM-5GZYH 16.4
GTEX-13OW6-2626-SM-5IFF2 16.3
GTEX-13N11-0926-SM-5IJG2 16.1
GTEX-14A5I-1726-SM-5QGQ5 15.8
GTEX-ZVT4-0626-SM-5E45T 15.8
GTEX-ZAB5-0426-SM-5CVMI 15.7
GTEX-11ZVC-0726-SM-5FQT9 15.5
GTEX-TKQ2-1726-SM-4DXUP 15.3
GTEX-P78B-1326-SM-3P611 15.2
GTEX-S4Z8-0526-SM-4AD4T 15.2
GTEX-14E1K-0326-SM-5S2PE 15.1
GTEX-U3ZN-0226-SM-3DB8D 15.0
GTEX-ZAB4-0826-SM-5LU9D 14.8
GTEX-12WSL-0226-SM-5CVMJ 14.6
GTEX-131YS-1626-SM-5HL6C 14.5
GTEX-131XH-0626-SM-5LZWH 13.5
GTEX-13O3O-1826-SM-5IFGW 13.5
GTEX-12WSM-0726-SM-5GCOW 13.4
GTEX-S33H-1626-SM-4AD68 13.4
GTEX-XBEC-1526-SM-4AT68 13.4
GTEX-139TS-1426-SM-5IFJD 13.3
GTEX-13FTW-1126-SM-5J2NV 13.1
GTEX-145MO-2326-SM-5NQ9K 13.1
GTEX-14753-1626-SM-5NQ9L 13.0
GTEX-Q734-0326-SM-48U15 12.8
GTEX-RM2N-1926-SM-48FCU 12.8
GTEX-13113-1326-SM-5GCOI 12.6
GTEX-13NZ9-1326-SM-5MR3V 12.5
GTEX-13PVR-0126-SM-5S2PY 12.4
GTEX-13QJC-0726-SM-5RQJK 12.4
GTEX-RNOR-1426-SM-48FDJ 12.3
GTEX-ZYY3-0626-SM-5NQ6W 11.7
GTEX-UPIC-0926-SM-4IHLV 11.6
GTEX-11DXZ-0126-SM-5EGGY 11.4
GTEX-RWSA-1426-SM-47JXA 11.4
GTEX-ZYT6-0626-SM-5E45V 11.4
GTEX-WFON-1726-SM-4LVMQ 11.3
GTEX-ZF29-2026-SM-4WWB7 11.3
GTEX-13112-1426-SM-5EGH8 11.2
GTEX-X4EO-1126-SM-4QARQ 11.2
GTEX-X261-1726-SM-4PQYT 11.1
GTEX-WYVS-1926-SM-4PQZ2 11.0
GTEX-QDVN-0826-SM-48TZ2 10.9
GTEX-R53T-0326-SM-48FEC 10.6
GTEX-145LU-1326-SM-5LU9N 10.3
GTEX-Z9EW-0426-SM-5CVM9 10.2
GTEX-UTHO-2426-SM-4JBHD 10.1
GTEX-11GSP-0626-SM-5986T 10.0
GTEX-REY6-1226-SM-48FDR 10.0
GTEX-OOBJ-0826-SM-3NB2K 9.8
GTEX-QEL4-1226-SM-447A4 9.8
GTEX-VUSG-0126-SM-4KL1X 9.7
GTEX-1269C-0626-SM-5FQSS 9.3
GTEX-UPK5-1426-SM-4JBHH 9.1
GTEX-ZTPG-1426-SM-51MT3 9.0
GTEX-13NZB-0626-SM-5IFH6 8.7
GTEX-YEC4-0826-SM-5P9FV 8.5
GTEX-S32W-1926-SM-4AD63 8.3
GTEX-12ZZZ-1326-SM-59HKW 8.1
GTEX-14C38-1526-SM-5RQJ7 8.0
GTEX-12KS4-1326-SM-5LUB3 7.9
GTEX-144GM-1326-SM-5LU5E 7.9
GTEX-11NUK-1226-SM-5P9GM 7.7
GTEX-12696-0826-SM-5EGGE 6.2
GTEX-139YR-0226-SM-5IFEM 6.2
GTEX-146FH-1526-SM-5NQBU 5.6
GTEX-YFC4-1526-SM-5IFJS 5.6
GTEX-12WSG-0626-SM-5FQTQ 5.5
GTEX-131XE-0326-SM-5LZVO 5.4
GTEX-X3Y1-2726-SM-4PQZH 5.2
GTEX-WQUQ-1926-SM-4OOSA 4.7
GTEX-X4XY-1626-SM-46MVN 4.6
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

294.6

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 294.6
FF:10018-101C9 64,69,70 years, mixed 294.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.