Tissue expression of CDH1 - Staining in lung

LUNG - Expression summary

Protein expression

RNA expression

HPA:	54.5	TPM
GTEx:	14.4	RPKM
FANTOM5:	139.9	Tags Per Million

LUNG - Annotated protein expression

Annotated protein
expression

Macrophages:	Low
Pneumocytes:	High

Antibody staining	Antibody HPA004812	Antibody CAB000087	Antibody CAB028364	Antibody CAB072855	Antibody CAB072856	Antibody CAB072857
Macrophages	Low	Not detected	Not detected	Not detected	Not detected	Low
Pneumocytes	Medium	Low	Medium	Low	Low	Not detected

LUNG - HPA RNA-seq

Average TPM	54.5

Female, age 71

Sample 1
TPM: 79.9

Cell types%

Pneumocytes: 40
Bronchial epithelium: 5
Endothelial cells: 25
Macrophages: 10
Other cell types: 20

Male, age 57

Sample 2
TPM: 46.9

Cell types%

Pneumocytes: 35
Bronchial epithelium: 5
Endothelial cells: 30
Macrophages: 10
Other cell types: 20

Female, age 71

Sample 3
TPM: 58.7

Cell types%

Pneumocytes: 35
Bronchial epithelium: 10
Endothelial cells: 25
Macrophages: 10
Other cell types: 20

Female, age 74

Sample 4
TPM: 48.2

Cell types%

Pneumocytes: 40
Bronchial epithelium: 0
Endothelial cells: 30
Macrophages: 15
Other cell types: 15

Female, age 73

Sample 5
TPM: 45.9

Cell types%

Pneumocytes: 30
Bronchial epithelium: 5
Endothelial cells: 30
Macrophages: 10
Other cell types: 25

Male, age 74

Sample 6
TPM: 42.2

Cell types%

Pneumocytes: 25
Bronchial epithelium: 0
Endothelial cells: 35
Macrophages: 5
Other cell types: 35

Female, age 70

Sample 7
TPM: 73.4

Cell types%

Pneumocytes: 35
Bronchial epithelium: 5
Endothelial cells: 35
Macrophages: 5
Other cell types: 20

Female, age 75

Sample 8
TPM: 57.2

Cell types%

Pneumocytes: 20
Bronchial epithelium: 10
Endothelial cells: 20
Macrophages: 10
Other cell types: 40

Male, age 63

Sample 9
TPM: 38.2

Cell types%

Pneumocytes: 25
Bronchial epithelium: 5
Endothelial cells: 25
Macrophages: 15
Other cell types: 30

LUNG - GTEx RNA-seq

Average RPKM	14.4

GTEx sample id

RPKM

Lung

Lung
RPKM: 14.4

Samples: 320

Max RPKM: 51.2
Min RPKM: 1.4
Std RPKM: 8.6
Median RPKM: 12.8

GTEX-13VXT-1426-SM-5LU4B

51.2

GTEX-OHPM-0526-SM-2YUMJ

44.3

GTEX-12WSN-0626-SM-5BC61

41.1

GTEX-P4PP-0526-SM-2HMKE

40.7

GTEX-O5YW-0526-SM-2YUMX

38.8

GTEX-WFON-0426-SM-3GIL4

35.6

GTEX-ZLV1-0426-SM-4WWC2

35.1

GTEX-13QBU-0726-SM-5J2OA

34.4

Show all

LUNG - FANTOM5 CAGE

Average Tags Per Million	139.9

FANTOM5 sample id

Sample description

Tags Per Million

Lung
Tags Per Million: 172.7

FF:10019-101D1

46,65,94 years, mixed

172.7

Lung - right lower lobe
Tags Per Million: 107.2

FF:10075-102A3

29 years, male

107.2