We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
CTNNA1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:134.5TPM
GTEx:68.7RPKM
FANTOM5:175.5Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Medium
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA046119

 

Antibody CAB021089

 

Adipocytes

Low   Not detected  

Glandular cells

Medium   Medium  

Myoepithelial cells

Low   Not detected  
   
   
   

BREAST - HPA RNA-seq

Average TPM

134.5

overview Female, age 52
Sample 1
TPM: 115.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 122.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 153.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 147.2
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

68.7

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 68.7
Samples: 214

Max RPKM: 93
Min RPKM: 43.4
Std RPKM: 8.4
Median RPKM: 68
GTEX-13O3O-0826-SM-5K7WE 93.0
GTEX-1313W-0826-SM-5EQ4T 90.6
GTEX-13OW5-2226-SM-5L3HC 87.4
GTEX-11WQK-2426-SM-5GU5C 86.9
GTEX-11DXW-0626-SM-5N9ER 86.7
GTEX-T2IS-1526-SM-32QPR 86.0
GTEX-13O3Q-2226-SM-5KM4O 84.5
GTEX-11DZ1-0326-SM-5N9BN 84.3
GTEX-1314G-1226-SM-5BC6D 83.9
GTEX-ZF3C-2326-SM-5S2MZ 83.9
GTEX-13W46-0826-SM-5LU3H 83.8
GTEX-14753-2426-SM-5LU8U 82.9
GTEX-REY6-2426-SM-48FF5 82.9
GTEX-YJ8O-2226-SM-5IFHW 82.7
GTEX-ZVE2-1226-SM-5NQ8R 82.6
GTEX-XUZC-1626-SM-4BRVP 82.3
GTEX-WOFL-0826-SM-3MJG1 82.1
GTEX-13OW8-0226-SM-5K7UP 82.0
GTEX-11OF3-1926-SM-59889 81.4
GTEX-146FH-0826-SM-5SI8T 81.4
GTEX-11O72-2126-SM-5N9FO 81.3
GTEX-13NZ9-1026-SM-5MR5K 81.3
GTEX-QEG5-0726-SM-4R1JQ 80.9
GTEX-X261-0626-SM-3NMD9 80.5
GTEX-ZU9S-1926-SM-5NQBP 80.4
GTEX-ZY6K-1626-SM-5GZWV 79.4
GTEX-11TUW-1826-SM-5BC5D 79.2
GTEX-S7SE-0826-SM-4AT4D 79.0
GTEX-ZC5H-2626-SM-5J2MG 79.0
GTEX-13CF3-2126-SM-5IFJP 78.9
GTEX-13S86-1226-SM-5S2OA 78.6
GTEX-13QIC-2326-SM-5LU5N 78.3
GTEX-144GL-2026-SM-5LU3O 78.2
GTEX-1117F-2826-SM-5GZXL 78.1
GTEX-ZYFC-0826-SM-5E44K 78.0
GTEX-WYBS-0926-SM-3NM94 77.7
GTEX-S33H-0326-SM-4AD6N 77.6
GTEX-ZVT4-1026-SM-57WC4 77.3
GTEX-TKQ1-0226-SM-33HB5 77.0
GTEX-X4EP-2926-SM-3P5YQ 77.0
GTEX-ZV7C-1826-SM-5NQ83 76.9
GTEX-13PVQ-1026-SM-5KM3M 76.8
GTEX-ZVZQ-0826-SM-51MRF 76.2
GTEX-XOT4-0726-SM-4GIAW 76.1
GTEX-133LE-1726-SM-5K7VQ 75.9
GTEX-WI4N-1426-SM-3LK7H 75.1
GTEX-ZLV1-1426-SM-4WWES 74.9
GTEX-Y8E4-1626-SM-5S2MW 74.7
GTEX-11GS4-2126-SM-5A5KR 74.6
GTEX-ZUA1-1526-SM-59HLS 74.6
GTEX-11P7K-0726-SM-5EGKX 74.4
GTEX-11DXY-2326-SM-5GICW 74.1
GTEX-12WSM-1726-SM-5BC6J 73.9
GTEX-U3ZH-1426-SM-4DXSR 73.9
GTEX-Y5V5-2126-SM-4WWFO 73.9
GTEX-11EI6-0626-SM-5985T 73.6
GTEX-ZDYS-1126-SM-5K7UB 73.6
GTEX-R55F-1726-SM-2TF4R 73.5
GTEX-11WQC-1726-SM-5GU4W 73.4
GTEX-13CF2-2026-SM-5K7VI 73.4
GTEX-145MO-0826-SM-5NQBL 73.2
GTEX-13NZ8-0126-SM-5IJCT 73.1
GTEX-147F4-2826-SM-5NQBN 73.1
GTEX-ZWKS-2826-SM-5NQ74 73.0
GTEX-11EMC-2026-SM-5A5JV 72.9
GTEX-11EM3-1326-SM-5N9C6 72.6
GTEX-13N1W-0626-SM-5MR4U 72.6
GTEX-Y111-2026-SM-4SOJA 72.6
GTEX-YEC3-1026-SM-5IFI5 72.6
GTEX-14E6E-1326-SM-5S2NR 72.3
GTEX-R3RS-0626-SM-48FE1 72.3
GTEX-ZF29-1926-SM-5S2P1 72.2
GTEX-T6MO-0326-SM-32QOK 71.8
GTEX-1192X-2326-SM-5987X 71.6
GTEX-T5JC-2126-SM-32PMO 71.6
GTEX-12WSK-2226-SM-5GCO5 71.3
GTEX-11NV4-2026-SM-5N9DG 71.0
GTEX-XV7Q-2326-SM-4BRVZ 71.0
GTEX-SE5C-2126-SM-4BRUJ 70.7
GTEX-117XS-1926-SM-5GICO 70.4
GTEX-ZTTD-1026-SM-51MRD 70.4
GTEX-11PRG-0826-SM-5EQ6A 70.0
GTEX-11ZTT-2326-SM-5EQLG 69.9
GTEX-131XW-0726-SM-5EGK3 69.7
GTEX-ZA64-1526-SM-5CVMD 69.7
GTEX-132NY-0826-SM-5K7Y7 69.3
GTEX-13O3P-0826-SM-5L3DH 69.3
GTEX-ZT9W-2026-SM-51MRA 69.2
GTEX-13FTY-2226-SM-5J1ND 69.0
GTEX-Y5V6-2126-SM-4WWFX 69.0
GTEX-RUSQ-2026-SM-4GIAK 68.9
GTEX-11ZUS-0826-SM-5FQUY 68.8
GTEX-12WSN-1326-SM-5GCNT 68.8
GTEX-X4XY-0926-SM-4E3JD 68.8
GTEX-Y114-2026-SM-4TT7L 68.8
GTEX-13W3W-1226-SM-5LU4H 68.7
GTEX-XMD2-0926-SM-4WWEF 68.7
GTEX-PSDG-1626-SM-48TCQ 68.6
GTEX-U8XE-0826-SM-4E3J1 68.5
GTEX-VUSG-2226-SM-4KKZO 68.5
GTEX-145ME-1526-SM-5Q5F2 68.2
GTEX-YFCO-1826-SM-4W1YH 68.2
GTEX-11ONC-2126-SM-5HL6E 68.1
GTEX-11P81-1926-SM-5BC53 68.1
GTEX-WFON-1826-SM-3GILG 68.1
GTEX-ZTX8-1226-SM-4YCE9 68.1
GTEX-13PL6-2926-SM-5L3I2 68.0
GTEX-S32W-2026-SM-4AD6E 68.0
GTEX-1269C-2426-SM-5FQSN 67.9
GTEX-ZXES-0826-SM-5E43C 67.9
GTEX-111YS-1926-SM-5GICC 67.8
GTEX-13FTW-1426-SM-5LZWZ 67.6
GTEX-144GM-0926-SM-5O994 67.3
GTEX-TKQ2-1826-SM-33HB2 67.0
GTEX-1211K-1926-SM-5EQLB 66.9
GTEX-13NZB-2126-SM-5MR4Y 66.9
GTEX-11TT1-2126-SM-5GU5Y 66.5
GTEX-S4Q7-1126-SM-4AD6R 66.4
GTEX-12WSB-0626-SM-59HJO 66.3
GTEX-1399U-1826-SM-5PNZ1 66.2
GTEX-12KS4-0126-SM-5Q5A5 66.1
GTEX-WRHU-0326-SM-3MJFY 66.1
GTEX-ZVTK-0326-SM-51MRR 66.1
GTEX-QDT8-0626-SM-48TYW 65.9
GTEX-ZV6S-1826-SM-5NQ8D 65.9
GTEX-Y5LM-1726-SM-4VDSX 65.8
GTEX-139T6-1626-SM-5PNYZ 65.7
GTEX-ZEX8-2226-SM-57WC6 65.7
GTEX-Y8LW-1626-SM-5IFHX 65.6
GTEX-ZPIC-1126-SM-5BC7F 65.4
GTEX-12ZZX-1126-SM-5EGKB 65.3
GTEX-RU72-0626-SM-46MUI 65.3
GTEX-S4P3-1326-SM-4AD6V 65.2
GTEX-VJWN-0726-SM-3GIJ8 65.2
GTEX-ZZ64-1226-SM-5E43R 65.2
GTEX-RWS6-1926-SM-47JXY 65.1
GTEX-YFC4-1426-SM-5IFJG 65.0
GTEX-ZAB4-2526-SM-5HL8M 65.0
GTEX-R53T-1526-SM-48FEK 64.9
GTEX-ZDXO-0126-SM-5S2ND 64.9
GTEX-ZF2S-2026-SM-5E461 64.8
GTEX-12BJ1-1826-SM-5HL9N 64.6
GTEX-X15G-1626-SM-3NMB3 64.6
GTEX-S4UY-0726-SM-4AD6X 64.5
GTEX-UTHO-1026-SM-3GAF7 64.4
GTEX-ZQG8-0726-SM-5P9H9 64.4
GTEX-Y3IK-2326-SM-4WWDT 64.3
GTEX-139T8-0826-SM-5L3DE 64.1
GTEX-11EQ9-1826-SM-5Q5AJ 64.0
GTEX-13O61-1826-SM-5KM4I 64.0
GTEX-ZDTT-2126-SM-5S2OJ 63.7
GTEX-13D11-1026-SM-5IJFB 63.6
GTEX-T6MN-0726-SM-32PML 63.6
GTEX-ZAJG-0626-SM-5HL8X 63.6
GTEX-SIU7-1626-SM-4BRUK 63.5
GTEX-Q2AG-0326-SM-48U1O 63.4
GTEX-W5X1-2326-SM-3GIL6 63.4
GTEX-R55D-0826-SM-48FEA 63.3
GTEX-S341-1526-SM-4AD6K 63.1
GTEX-XUW1-2326-SM-4BOO5 63.1
GTEX-ZYT6-0126-SM-5E45J 63.1
GTEX-ZZPU-0626-SM-5E43T 62.9
GTEX-ZYW4-0826-SM-5GIDG 62.8
GTEX-145MN-1926-SM-5SIAI 62.7
GTEX-QVJO-1826-SM-447C9 62.7
GTEX-UPK5-2326-SM-3P5Z8 62.6
GTEX-TML8-1226-SM-32QON 62.5
GTEX-132AR-0826-SM-5EGK6 62.1
GTEX-WY7C-2726-SM-3NB3P 62.1
GTEX-ZLFU-2126-SM-4WWEV 61.8
GTEX-13FHO-0826-SM-5L3E8 61.7
GTEX-13N11-1726-SM-5J1OJ 61.6
GTEX-U3ZN-1926-SM-4DXSG 61.6
GTEX-XGQ4-0926-SM-4AT4U 61.5
GTEX-13113-1726-SM-5GCOO 61.4
GTEX-11GSO-1926-SM-5A5K3 61.3
GTEX-11NSD-0926-SM-5N9DR 61.1
GTEX-WYVS-1726-SM-3NMAY 61.0
GTEX-ZYWO-2326-SM-5GZY4 60.8
GTEX-QMRM-1626-SM-4R1KV 60.5
GTEX-139TU-0626-SM-5KM3X 60.4
GTEX-WXYG-2226-SM-4E3IM 60.2
GTEX-131YS-0626-SM-5EGKL 60.1
GTEX-14ABY-2126-SM-5QGQZ 60.0
GTEX-UJHI-1426-SM-3DB9C 59.6
GTEX-XBED-1626-SM-47JYN 59.5
GTEX-YB5K-1626-SM-5IFIN 59.5
GTEX-WYJK-1326-SM-3NB2T 59.3
GTEX-11P82-1326-SM-5HL62 59.1
GTEX-ZVT2-1826-SM-5NQ8W 59.1
GTEX-Y3I4-1526-SM-4TT7K 59.0
GTEX-145LT-0726-SM-5S2VM 58.9
GTEX-TMMY-0726-SM-33HBE 58.6
GTEX-1122O-1226-SM-5H113 58.4
GTEX-11LCK-2426-SM-5HL5F 58.3
GTEX-Y9LG-1426-SM-5IFJZ 58.0
GTEX-11DXZ-1926-SM-5GZZL 57.7
GTEX-XMD1-0826-SM-4AT52 57.6
GTEX-11I78-2226-SM-5PNYA 57.5
GTEX-U412-1826-SM-4DXTJ 57.4
GTEX-13FTX-1126-SM-5N9EN 57.1
GTEX-XQ3S-1326-SM-4BOPQ 57.1
GTEX-ZQUD-1926-SM-51MSA 56.9
GTEX-YB5E-1726-SM-5IFJ3 55.3
GTEX-QEL4-2126-SM-447AE 54.8
GTEX-14AS3-1626-SM-5S2OY 54.7
GTEX-T2YK-2226-SM-32QPT 54.6
GTEX-XQ8I-2426-SM-4WAXY 54.5
GTEX-XUJ4-1926-SM-4BOOV 54.0
GTEX-132Q8-1426-SM-5EGK7 53.2
GTEX-T5JW-2026-SM-4DM63 53.0
GTEX-117YX-1426-SM-5H12H 52.8
GTEX-XYKS-1326-SM-4BRUN 52.7
GTEX-XMK1-1126-SM-4IHJ8 43.4
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

175.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 175.5
FF:10080-102A8 77 years, female 175.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.