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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:33.3RPKM
FANTOM5:138.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA046119

 

Antibody CAB021089

 

Glial cells

Not detected   Low  

Neuronal cells

Low   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

33.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 33.3
Samples: 117

Max RPKM: 68.6
Min RPKM: 12.7
Std RPKM: 8.7
Median RPKM: 32.6
GTEX-12WSA-0011-R5b-SM-5GU5I 68.6
GTEX-X4XX-0011-R5A-SM-46MWN 55.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 53.7
GTEX-XMD1-0011-R5A-SM-4AT47 51.0
GTEX-132Q8-0011-R5a-SM-5IJDM 49.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 47.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 47.0
GTEX-QVJO-0011-R5A-SM-2S1QM 46.4
GTEX-13NYS-0011-R5a-SM-5MR4D 46.1
GTEX-OHPN-0011-R5A-SM-2I5FF 46.0
GTEX-X585-0011-R5A-SM-46MVI 46.0
GTEX-13JUV-0011-R5a-SM-5LZY5 45.4
GTEX-QMR6-0011-R5A-SM-32PKT 44.9
GTEX-R55E-0011-R5A-SM-2TC5N 44.9
GTEX-WWYW-0011-R5A-SM-3NB3E 44.4
GTEX-13X6I-0011-R5a-SM-5PNWW 43.6
GTEX-11H98-0011-R5b-SM-57WCF 43.5
GTEX-PVOW-0011-R5A-SM-32PL7 43.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 43.3
GTEX-WHSE-0011-R5A-SM-3P5ZO 43.1
GTEX-WL46-0011-R5A-SM-3LK6V 42.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 40.9
GTEX-N7MS-0011-R5a-SM-2HMK8 40.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40.3
GTEX-P44H-0011-R5A-SM-2XCEX 40.0
GTEX-T5JC-0011-R5A-SM-32PLK 39.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 39.3
GTEX-12WSB-0011-R5b-SM-5GU67 38.6
GTEX-NL4W-0011-R5a-SM-2I3GD 38.2
GTEX-13JVG-0011-R5a-SM-5MR4O 38.1
GTEX-N7MT-0011-R5a-SM-2I3G6 37.9
GTEX-13FLV-0011-R5a-SM-5LZWT 37.6
GTEX-13X6K-0011-R5b-SM-5PNUE 37.1
GTEX-12WSF-0011-R5a-SM-5HL8K 36.7
GTEX-RVPV-0011-R5A-SM-2TF69 36.6
GTEX-RU72-0011-R5A-SM-2TF6U 36.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 35.8
GTEX-T6MN-0011-R5A-SM-32QPD 35.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 35.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 35.1
GTEX-WZTO-0011-R5B-SM-3NMC5 34.8
GTEX-131YS-0011-R5b-SM-5K7YB 34.6
GTEX-13OVH-0011-R5b-SM-5KM4L 34.4
GTEX-13OW6-0011-R5a-SM-5O9BK 34.4
GTEX-14BIM-0011-R5b-SM-5S2RM 34.3
GTEX-145LS-0011-R5a-SM-5SI65 34.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 34.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 33.9
GTEX-1399T-0011-R5b-SM-5IJDK 33.8
GTEX-S7SE-0011-R5A-SM-2XCDA 33.5
GTEX-13G51-0011-R5a-SM-5L3EB 33.1
GTEX-NL3H-0011-R5a-SM-2I3GB 33.1
GTEX-UTHO-0011-R5A-SM-3GIJD 33.1
GTEX-WVLH-0011-R5A-SM-3MJFW 33.1
GTEX-144GO-0011-R5a-SM-5PNUR 32.9
GTEX-X261-0011-R5A-SM-3NMB4 32.9
GTEX-ZUA1-0011-R5b-SM-51MTG 32.8
GTEX-139TT-0011-R5b-SM-5K7W8 32.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 32.6
GTEX-Z93S-0011-R5b-SM-4RGNI 32.6
GTEX-11GSP-0011-R5a-SM-57WBE 32.3
GTEX-13OW5-0011-R5b-SM-5L3FR 32.1
GTEX-1445S-0011-R5a-SM-5PNUS 32.1
GTEX-1313W-0011-R5b-SM-5L3EP 31.8
GTEX-11OF3-0011-R5a-SM-57WB4 31.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 31.1
GTEX-13O3O-0011-R5b-SM-5KM44 31.1
GTEX-ZE7O-0011-R5a-SM-57WBO 31.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 31.0
GTEX-RVPU-0011-R5A-SM-2XCAD 30.9
GTEX-YFC4-0011-R5a-SM-4RGLR 30.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 30.4
GTEX-ZXG5-0011-R5b-SM-57WBN 30.4
GTEX-13FLW-0011-R5a-SM-5LZX6 30.2
GTEX-14ABY-0011-R5b-SM-5SI7B 30.2
GTEX-NPJ7-0011-R5a-SM-33HBK 30.0
GTEX-TSE9-0011-R5A-SM-3DB7J 29.5
GTEX-139T8-0011-R5b-SM-5J1MO 29.4
GTEX-139TS-0011-R5b-SM-5J2MZ 29.4
GTEX-13FXS-0011-R5b-SM-5LZYE 29.3
GTEX-13NYB-0011-R5a-SM-5MR45 29.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 29.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 29.0
GTEX-145MH-0011-R5a-SM-5P9JT 28.8
GTEX-13OVL-0011-R5b-SM-5L3FU 28.4
GTEX-XOTO-0011-R5A-SM-4B657 28.3
GTEX-11NV4-0011-R5a-SM-5NQ88 28.2
GTEX-13CZV-0011-R5a-SM-5K7XA 27.9
GTEX-144GL-0011-R5b-SM-5PNUJ 27.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 27.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 27.5
GTEX-T2IS-0011-R5A-SM-32QP4 27.3
GTEX-13OW7-0011-R5b-SM-5O9DM 27.1
GTEX-12WSD-0011-R5b-SM-5CVNG 26.5
GTEX-13VXU-0011-R5a-SM-5O9D7 26.4
GTEX-12WSC-0011-R5b-SM-5CVNS 26.2
GTEX-OXRN-0011-R5A-SM-2I5EF 26.1
GTEX-11WQC-0011-R5a-SM-5BC74 25.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 25.4
GTEX-12ZZX-0011-R5a-SM-5HL89 24.7
GTEX-13S7M-0011-R5b-SM-5P9HS 24.3
GTEX-13SLX-0011-R5a-SM-5O9BV 23.7
GTEX-13X6J-0011-R5b-SM-5PNWT 23.4
GTEX-14BIN-0011-R5b-SM-5SI78 23.3
GTEX-ZVT3-0011-R5a-SM-51MSI 23.0
GTEX-13CF2-0011-R5a-SM-5LZWS 22.9
GTEX-13CIG-0011-R5b-SM-5L3F2 22.7
GTEX-13112-0011-R5b-SM-5DUV8 22.2
GTEX-ZV68-0011-R5a-SM-4YCDW 21.7
GTEX-12WSH-0011-R5b-SM-5P9F3 21.5
GTEX-13FHP-0011-R5b-SM-5LZY2 21.0
GTEX-S7PM-0011-R5A-SM-3NM8G 20.7
GTEX-1477Z-0011-R5b-SM-5PNUO 19.6
GTEX-11UD1-0011-R5b-SM-5P9FP 19.3
GTEX-YJ89-0011-R5a-SM-4V6GM 18.5
GTEX-13NZA-0011-R5b-SM-5KM4K 14.5
GTEX-145MG-0011-R5b-SM-5S2VU 12.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

138.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 138.7
FF:10164-103B2 76 years, female 164.4
FF:10379-105H1 89 years, female 113.0

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