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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:11.6TPM
GTEx:8.1RPKM
FANTOM5:66.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody CAB025428

 

Glandular cells

Not detected  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

11.6

overview Male, age 65
Sample 1
TPM: 7.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 10.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 16.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 12.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

8.1

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 8.1
Samples: 88

Max RPKM: 49.2
Min RPKM: 1.9
Std RPKM: 6.8
Median RPKM: 5.8
GTEX-111CU-1326-SM-5NQ8L 49.2
GTEX-13OVI-1926-SM-5IJCG 24.6
GTEX-145ME-0926-SM-5O9AR 23.8
GTEX-117YX-0326-SM-5GICL 23.0
GTEX-ZF2S-1726-SM-57WFT 20.9
GTEX-XMK1-1826-SM-4B66F 17.9
GTEX-12WSK-1526-SM-5CVNO 17.9
GTEX-Y114-1426-SM-4TT6W 16.9
GTEX-13O21-1026-SM-5IJDU 16.2
GTEX-WFG8-1626-SM-4LVMB 15.1
GTEX-ZQUD-0926-SM-57WE3 14.6
GTEX-1192X-2526-SM-59868 14.3
GTEX-131XG-1726-SM-5LZUR 13.3
GTEX-ZQG8-2526-SM-57WEQ 13.3
GTEX-ZC5H-2326-SM-4WAYT 13.1
GTEX-13111-1426-SM-5DUW3 13.1
GTEX-Y3IK-1726-SM-4YCCR 12.9
GTEX-WEY5-1526-SM-4LMJF 12.1
GTEX-13QBU-1926-SM-5IJEW 11.9
GTEX-WFG7-1726-SM-4LVME 10.8
GTEX-Y5LM-1626-SM-4VDTB 10.8
GTEX-ZPIC-2326-SM-57WDW 10.3
GTEX-148VJ-2226-SM-5NQ9M 10.1
GTEX-ZVT2-2126-SM-5NQ93 9.8
GTEX-ZTPG-2626-SM-57WFX 9.8
GTEX-VUSG-1726-SM-4KKZL 9.6
GTEX-13RTK-0826-SM-5Q5C6 9.1
GTEX-13113-1226-SM-5EGHT 9.0
GTEX-XBED-1426-SM-4AT4G 8.1
GTEX-ZP4G-1626-SM-57WGD 7.9
GTEX-X15G-1426-SM-4PQZK 7.9
GTEX-11NSD-1726-SM-5N9C3 7.8
GTEX-XAJ8-0526-SM-47JYK 7.5
GTEX-Z9EW-0926-SM-5CVMM 7.0
GTEX-WRHK-1026-SM-4MVOD 7.0
GTEX-139YR-2226-SM-5IFFW 6.9
GTEX-12BJ1-1926-SM-5HL9Z 6.7
GTEX-UPK5-2026-SM-4JBIM 6.6
GTEX-XXEK-1026-SM-4BRUW 6.5
GTEX-11XUK-1426-SM-5EQMG 6.4
GTEX-13O61-1326-SM-5KM31 6.2
GTEX-11P7K-1626-SM-5GU63 6.0
GTEX-ZYWO-1526-SM-5SIAL 6.0
GTEX-ZZ64-0526-SM-5GZXM 5.9
GTEX-13FH7-1226-SM-5IJFK 5.8
GTEX-ZLFU-1526-SM-4WWBT 5.6
GTEX-145LT-1026-SM-5LU9O 5.6
GTEX-139T6-1026-SM-5IJGC 5.4
GTEX-WH7G-1626-SM-4LVMY 5.4
GTEX-11P82-0826-SM-5P9GU 5.3
GTEX-13FTW-2026-SM-5IJE2 5.2
GTEX-ZXES-1526-SM-5NQ95 5.1
GTEX-ZYFG-2026-SM-5E43Y 5.1
GTEX-1399U-2126-SM-5IFEZ 4.9
GTEX-XGQ4-1326-SM-4GIDU 4.7
GTEX-VJYA-0926-SM-4KL1N 4.7
GTEX-ZLV1-1126-SM-4WWBW 4.5
GTEX-WFJO-0926-SM-4LVM2 4.4
GTEX-ZVP2-1726-SM-5GU5P 4.3
GTEX-ZEX8-1826-SM-57WBH 4.3
GTEX-ZPCL-1726-SM-57WEO 4.2
GTEX-1399R-2026-SM-5K7WN 4.2
GTEX-11DXZ-1326-SM-5H11X 4.0
GTEX-11DXX-1626-SM-5H11H 4.0
GTEX-11VI4-1626-SM-5EQKO 3.8
GTEX-11EQ9-1326-SM-5985X 3.8
GTEX-133LE-1426-SM-5IFH1 3.7
GTEX-131XF-1326-SM-5GCMQ 3.7
GTEX-13CF3-1226-SM-5LZXN 3.7
GTEX-ZA64-1226-SM-5HL7B 3.6
GTEX-ZTX8-0526-SM-59HLD 3.5
GTEX-13PL7-2626-SM-5IFH4 3.5
GTEX-WQUQ-2426-SM-4MVNW 3.5
GTEX-ZTSS-0926-SM-59865 3.4
GTEX-1399S-2026-SM-5KM4B 3.4
GTEX-XUZC-1426-SM-4BRV3 3.3
GTEX-X5EB-1626-SM-4E3IV 3.3
GTEX-YB5E-1526-SM-5IFIE 3.2
GTEX-YEC4-1726-SM-4W21E 3.0
GTEX-Y9LG-1626-SM-5IFHM 2.9
GTEX-14DAR-1426-SM-5RQIR 2.9
GTEX-11I78-1126-SM-5A5K5 2.8
GTEX-14E6E-1626-SM-5RQI7 2.7
GTEX-1122O-1326-SM-5H11F 2.5
GTEX-ZVZP-1826-SM-5GZXB 2.3
GTEX-13D11-0726-SM-5LZZB 2.3
GTEX-YF7O-1826-SM-5IFIU 2.1
GTEX-111YS-1426-SM-5GID8 1.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

66.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 66.7
FF:10024-101D6 15,40,85 years, mixed 66.7

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