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LIMA1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:100.4TPM
GTEx:52.8RPKM
FANTOM5:147.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Low
Peripheral nerve:Low
Adipocytes:Not detected
Chondrocytes:Low
 

Antibody staining

Antibody HPA023871

  

Antibody HPA052645

  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Medium  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
 
 

Antibody staining

Antibody HPA023871

  

Antibody HPA052645

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

100.4
N/A Female, age 80
Sample 1
TPM: 104.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 95.0
N/A Female, age 57
Sample 3
TPM: 93.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 86.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 123.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

52.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 58.4
Samples: 350

Max RPKM: 132.9
Min RPKM: 21.5
Std RPKM: 20.8
Median RPKM: 55.3
GTEX-S7SE-0226-SM-2XCD4 132.9
GTEX-SSA3-0226-SM-32QPN 119.3
GTEX-PX3G-0226-SM-3NB2C 117.2
GTEX-ZVTK-0526-SM-5GZWT 115.2
GTEX-ZYY3-0226-SM-5E45M 114.8
GTEX-11PRG-0626-SM-5BC56 114.7
GTEX-Z93T-0226-SM-5HL5Z 114.0
GTEX-QDT8-0226-SM-32PL4 111.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 44.3
Samples: 227

Max RPKM: 131.7
Min RPKM: 12.8
Std RPKM: 17.3
Median RPKM: 40.7
GTEX-ZYFC-1826-SM-5GZZA 131.7
GTEX-11GS4-1026-SM-5N9DE 95.7
GTEX-11ZTS-1326-SM-5EQMA 94.6
GTEX-13PVQ-2226-SM-5L3G9 94.0
GTEX-1399T-1326-SM-5PNVH 88.1
GTEX-117YW-0826-SM-5H11O 86.4
GTEX-W5X1-1426-SM-3GIKH 84.7
GTEX-ZEX8-1226-SM-5S2OK 81.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

147.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 147.3
FF:10010-101C1 65,65,76 years, mixed 147.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.