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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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GYG2
  • TISSUE

  • CELL

  • CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

Glycogenin 2

Protein class

Enzymes, Predicted intracellular proteins

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA005495
HPA064686

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

The staining intensity of cancers varied between tumors. Most tumors showed weak to moderate cytoplasmic staining. Strongest staining was shown in melanomas, testicular and thyroid cancers.

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Papillary adenocarcinoma of thyroid exhibited strong cytoplasmic immunoreactivity. Several cases of melanomas showed weak to moderate cytoplasmic and nuclear staining. Remaining cancer tissues were weakly stained or negative.

GENE INFORMATION

Gene name

GYG2 (HGNC Symbol)

Synonyms

GN-2

Description

Glycogenin 2 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the the glycogenin family. Glycogenin is a self-glucosylating protein involved in the initiation reactions of glycogen biosynthesis. A gene on chromosome 3 encodes the muscle glycogenin and this X-linked gene encodes the glycogenin mainly present in liver; both are involved in blood glucose homeostasis. This gene has a short version on chromosome Y, which is 3' truncated and can not make a functional protein. Multiple alternatively spliced transcript variants encoding different isoforms have been identified.[provided by RefSeq, May 2010]

Chromosome

X

Cytoband

p22.33

Chromosome location (bp)

2828788 - 2882818

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000056998 (version 83.38)

Entrez gene

8908

UniProt

O15488 (UniProt - Evidence at protein level)

neXtProt

NX_O15488

Antibodypedia

GYG2 antibodies

PROTEIN BROWSER

GYG2-001
GYG2-005
GYG2-007
GYG2-008
GYG2-010

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

GYG2-001
ENSP00000370555
ENST00000381163
O15488 [Direct mapping]
Glycogenin-2
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0005975 [carbohydrate metabolic process]
GO:0005978 [glycogen biosynthetic process]
GO:0005980 [glycogen catabolic process]
GO:0006006 [glucose metabolic process]
GO:0008466 [glycogenin glucosyltransferase activity]
GO:0016757 [transferase activity, transferring glycosyl groups]
GO:0043202 [lysosomal lumen]
GO:0044281 [small molecule metabolic process]
Show all
501 aa
55.2 kDa
No 0
GYG2-005
ENSP00000487294
ENST00000353656
O15488 [Direct mapping]
Glycogenin-2
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0005975 [carbohydrate metabolic process]
GO:0005978 [glycogen biosynthetic process]
GO:0005980 [glycogen catabolic process]
GO:0006006 [glucose metabolic process]
GO:0008466 [glycogenin glucosyltransferase activity]
GO:0016757 [transferase activity, transferring glycosyl groups]
GO:0043202 [lysosomal lumen]
GO:0044281 [small molecule metabolic process]
Show all
430 aa
47.5 kDa
No 0
GYG2-007
ENSP00000381786
ENST00000398806
O15488 [Direct mapping]
Glycogenin-2
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0005975 [carbohydrate metabolic process]
GO:0005978 [glycogen biosynthetic process]
GO:0005980 [glycogen catabolic process]
GO:0006006 [glucose metabolic process]
GO:0008466 [glycogenin glucosyltransferase activity]
GO:0016757 [transferase activity, transferring glycosyl groups]
GO:0043202 [lysosomal lumen]
GO:0044281 [small molecule metabolic process]
Show all
470 aa
52 kDa
No 0
GYG2-008
ENSP00000430764
ENST00000520904
E5RIC9 [Direct mapping]
Glycogenin-2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016757 [transferase activity, transferring glycosyl groups]
Show all
138 aa
15.5 kDa
No 0
GYG2-010
ENSP00000370549
ENST00000381157
J3QSZ3 [Direct mapping]
Glycogenin-2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016757 [transferase activity, transferring glycosyl groups]
Show all
244 aa
26.2 kDa
No 0

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