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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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CREB3L3
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA040671

 

Antibody HPA056228

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA040671   HPA056228  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

10   13  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA040671

 

Antibody HPA056228

 
Immunohistochemistry


Validated
  Supported  
Western blot

Uncertain   Supported  
Protein array

Supported   Supported  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA040671

 

Antibody HPA056228

 

Formal validation: Orthogonal

Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
   

 

 

   

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.    
 

Standard validation

Supported   Supported  

   

Figure description

Immunohistochemical staining of human small intestine shows moderate cytoplasmic positivity in glandular cells.   Immunohistochemical staining of human duodenum shows strong cytoplasmic positivity in glandular cells.  

Expression

RNA: detected in 6 tissues
Protein: detected in 10 cell types
  RNA: detected in 6 tissues
Protein: detected in 5 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:1500   1:3000  

Literature conformity

Partly consistent with gene/protein characterization data.   Partly consistent with gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA040671

 

Antibody HPA056228

 

Standard validation

Uncertain

Single band larger than predicted size in kDa (+20%) but partly supported by experimental and/or bioinformatic data.
  Supported

Analysis performed using a standard panel of samples.
Single band corresponding to the predicted size in kDa (+/-20%).
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY410003)
  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

49.1, 48.9, 48.8, 35.8   49.1, 48.9, 48.8  

Antibody dilution

1:250   1:980  

PROTEIN ARRAY

 
 

Antibody HPA040671

 

Antibody HPA056228

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:500   1:12000  

ANTIGEN INFORMATION

 
 

Antibody HPA040671

 

Antibody HPA056228

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

90   82  

Antigen sequence

SYHPGNSCSTTTPGPVIQVPEASVTIDLEMWSPGGRICAEKPADPVDLSP
RCNLTVKDLLLSGSSGDLQQHHLGASYLLRPGAGHCQELV
 
DAVPGSEAPGPRPEADTTREESPGSPGADWGFQDTANLTNSTEELDNATL
VLRNATEGLGQVALLDWVAPGPSTGSGRAGLE
 

Matching transcripts

CREB3L3-001 - ENSP00000078445 [100%]
CREB3L3-003 - ENSP00000470119 [100%]
CREB3L3-005 - ENSP00000469355 [100%]
CREB3L3-002 - ENSP00000472399 [98%]
  CREB3L3-001 - ENSP00000078445 [100%]
CREB3L3-002 - ENSP00000472399 [100%]
CREB3L3-005 - ENSP00000469355 [100%]
 

Other gene match

   
ANTIGEN VIEW
CREB3L3-001
CREB3L3-002
CREB3L3-003
CREB3L3-005
 

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