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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:90.0TPM
GTEx:54.6RPKM
FANTOM5:146.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA043562

 

Antibody CAB010910

 

Glandular cells

High   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

90.0

overview Male, age 65
Sample 1
TPM: 84.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 89.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 97.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 88.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

54.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 54.6
Samples: 88

Max RPKM: 144.5
Min RPKM: 33.3
Std RPKM: 18.4
Median RPKM: 50.5
GTEX-VUSG-1726-SM-4KKZL 144.5
GTEX-UPK5-2026-SM-4JBIM 127.1
GTEX-ZC5H-2326-SM-4WAYT 102.2
GTEX-11NSD-1726-SM-5N9C3 98.0
GTEX-X15G-1426-SM-4PQZK 83.2
GTEX-131XG-1726-SM-5LZUR 78.3
GTEX-ZEX8-1826-SM-57WBH 75.7
GTEX-WFJO-0926-SM-4LVM2 73.3
GTEX-11XUK-1426-SM-5EQMG 73.3
GTEX-13O61-1326-SM-5KM31 72.7
GTEX-ZLFU-1526-SM-4WWBT 71.9
GTEX-WH7G-1626-SM-4LVMY 70.6
GTEX-11VI4-1626-SM-5EQKO 68.8
GTEX-ZVP2-1726-SM-5GU5P 66.8
GTEX-11P82-0826-SM-5P9GU 66.0
GTEX-Z9EW-0926-SM-5CVMM 65.8
GTEX-ZYWO-1526-SM-5SIAL 65.4
GTEX-WQUQ-2426-SM-4MVNW 64.1
GTEX-XAJ8-0526-SM-47JYK 63.9
GTEX-145ME-0926-SM-5O9AR 63.5
GTEX-WRHK-1026-SM-4MVOD 62.2
GTEX-11I78-1126-SM-5A5K5 61.5
GTEX-1399U-2126-SM-5IFEZ 61.2
GTEX-XGQ4-1326-SM-4GIDU 60.3
GTEX-13FH7-1226-SM-5IJFK 59.3
GTEX-139YR-2226-SM-5IFFW 59.1
GTEX-Y5LM-1626-SM-4VDTB 58.8
GTEX-1399S-2026-SM-5KM4B 58.7
GTEX-12BJ1-1926-SM-5HL9Z 58.4
GTEX-148VJ-2226-SM-5NQ9M 57.9
GTEX-1399R-2026-SM-5K7WN 57.8
GTEX-11DXX-1626-SM-5H11H 57.6
GTEX-133LE-1426-SM-5IFH1 56.2
GTEX-11EQ9-1326-SM-5985X 55.8
GTEX-131XF-1326-SM-5GCMQ 54.4
GTEX-XXEK-1026-SM-4BRUW 53.8
GTEX-ZTPG-2626-SM-57WFX 52.8
GTEX-11DXZ-1326-SM-5H11X 52.8
GTEX-ZP4G-1626-SM-57WGD 52.7
GTEX-13RTK-0826-SM-5Q5C6 52.5
GTEX-14E6E-1626-SM-5RQI7 52.5
GTEX-WFG8-1626-SM-4LVMB 52.2
GTEX-ZVT2-2126-SM-5NQ93 51.6
GTEX-13QBU-1926-SM-5IJEW 50.8
GTEX-13CF3-1226-SM-5LZXN 50.3
GTEX-ZZ64-0526-SM-5GZXM 49.9
GTEX-13111-1426-SM-5DUW3 49.4
GTEX-WEY5-1526-SM-4LMJF 48.9
GTEX-13FTW-2026-SM-5IJE2 48.8
GTEX-1192X-2526-SM-59868 47.9
GTEX-XUZC-1426-SM-4BRV3 47.5
GTEX-139T6-1026-SM-5IJGC 47.2
GTEX-VJYA-0926-SM-4KL1N 47.2
GTEX-13113-1226-SM-5EGHT 47.1
GTEX-YB5E-1526-SM-5IFIE 46.6
GTEX-YF7O-1826-SM-5IFIU 46.3
GTEX-11P7K-1626-SM-5GU63 46.1
GTEX-ZYFG-2026-SM-5E43Y 44.9
GTEX-ZTSS-0926-SM-59865 44.9
GTEX-117YX-0326-SM-5GICL 43.8
GTEX-ZVZP-1826-SM-5GZXB 43.5
GTEX-ZXES-1526-SM-5NQ95 43.3
GTEX-13D11-0726-SM-5LZZB 43.2
GTEX-XBED-1426-SM-4AT4G 43.1
GTEX-145LT-1026-SM-5LU9O 42.7
GTEX-WFG7-1726-SM-4LVME 42.7
GTEX-ZQG8-2526-SM-57WEQ 42.2
GTEX-14DAR-1426-SM-5RQIR 42.1
GTEX-ZLV1-1126-SM-4WWBW 41.7
GTEX-ZA64-1226-SM-5HL7B 41.4
GTEX-1122O-1326-SM-5H11F 40.7
GTEX-13O21-1026-SM-5IJDU 40.5
GTEX-XMK1-1826-SM-4B66F 40.0
GTEX-111CU-1326-SM-5NQ8L 39.8
GTEX-ZF2S-1726-SM-57WFT 39.7
GTEX-X5EB-1626-SM-4E3IV 39.5
GTEX-ZPCL-1726-SM-57WEO 39.3
GTEX-ZTX8-0526-SM-59HLD 38.1
GTEX-Y9LG-1626-SM-5IFHM 37.4
GTEX-ZPIC-2326-SM-57WDW 37.3
GTEX-Y114-1426-SM-4TT6W 37.1
GTEX-13PL7-2626-SM-5IFH4 36.9
GTEX-ZQUD-0926-SM-57WE3 36.4
GTEX-111YS-1426-SM-5GID8 36.3
GTEX-12WSK-1526-SM-5CVNO 35.2
GTEX-13OVI-1926-SM-5IJCG 34.5
GTEX-Y3IK-1726-SM-4YCCR 34.3
GTEX-YEC4-1726-SM-4W21E 33.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

146.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 146.9
FF:10024-101D6 15,40,85 years, mixed 146.9

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