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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ATP2C2
  • TISSUE

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CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

ATPase, Ca++ transporting, type 2C, member 2

Protein class

Enzymes, Predicted membrane proteins, Transporters

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA052262

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several colorectal and endometrial cancers along with a few melanomas, squamous cell carcinomas, breast and stomach cancers displayed weak to moderate membranous and/or cytoplasmic positivity. A few ovarian cancers were moderate to strongly stained. Remaining cancer tissues were negative.

GENE INFORMATION

Gene name

ATP2C2 (HGNC Symbol)

Synonyms

KIAA0703, SPCA2

Description

ATPase, Ca++ transporting, type 2C, member 2 (HGNC Symbol)

Entrez gene summary

Chromosome

16

Cytoband

q24.1

Chromosome location (bp)

84368527 - 84464187

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000064270 (version 83.38)

Entrez gene

9914

UniProt

O75185 (UniProt - Evidence at protein level)

neXtProt

NX_O75185

Antibodypedia

ATP2C2 antibodies

PROTEIN BROWSER

ATP2C2-001
ATP2C2-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ATP2C2-001
ENSP00000262429
ENST00000262429
O75185 [Direct mapping]
Calcium-transporting ATPase type 2C member 2
Show all
Enzymes
   ENZYME proteins
   Hydrolases
Transporters
   Primary Active Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0000166 [nucleotide binding]
GO:0005388 [calcium-transporting ATPase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005887 [integral component of plasma membrane]
GO:0006816 [calcium ion transport]
GO:0006874 [cellular calcium ion homeostasis]
GO:0008152 [metabolic process]
GO:0015410 [manganese-transporting ATPase activity]
GO:0016021 [integral component of membrane]
GO:0034220 [ion transmembrane transport]
GO:0046872 [metal ion binding]
GO:0055085 [transmembrane transport]
GO:0070588 [calcium ion transmembrane transport]
GO:0071421 [manganese ion transmembrane transport]
Show all
946 aa
103.2 kDa
No >9
ATP2C2-002
ENSP00000397925
ENST00000416219
A0A0A0MSP0 [Direct mapping]
Calcium-transporting ATPase
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0005388 [calcium-transporting ATPase activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0006816 [calcium ion transport]
GO:0008152 [metabolic process]
GO:0009898 [cytoplasmic side of plasma membrane]
GO:0016021 [integral component of membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0046872 [metal ion binding]
GO:0048471 [perinuclear region of cytoplasm]
GO:0061180 [mammary gland epithelium development]
GO:0070588 [calcium ion transmembrane transport]
GO:0072661 [protein targeting to plasma membrane]
GO:0090280 [positive regulation of calcium ion import]
Show all
975 aa
106.2 kDa
No >9

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