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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:91.8TPM
GTEx:71.0RPKM
FANTOM5:104.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Not detected
Chondrocytes:Not detected
 
 

Antibody staining

Antibody HPA031068

  

Antibody CAB024930

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Not detected  

Peripheral nerve

 Not detected  

Chondrocytes

 Not detected  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Peripheral nerve:Low
Fibroblasts:Not detected
 

Antibody staining

Antibody HPA031068

  

Antibody CAB024930

  

Adipocytes

 Medium   Not detected  

Chondrocytes

 Medium   Not detected  

Peripheral nerve

 Medium   Not detected  

Fibroblasts

 Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

91.8
N/A Female, age 80
Sample 1
TPM: 105.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 71.6
N/A Female, age 57
Sample 3
TPM: 68.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 110.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 103.4
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

71.0

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 72.3
Samples: 350

Max RPKM: 134.8
Min RPKM: 36.5
Std RPKM: 16.4
Median RPKM: 70.4
GTEX-OXRN-0226-SM-2I5EJ 134.8
GTEX-Q734-1826-SM-2I3EL 123.8
GTEX-146FQ-0226-SM-5NQAL 115.3
GTEX-P4PQ-0226-SM-2S1NK 114.1
GTEX-OOBK-0226-SM-2YUMF 112.4
GTEX-111CU-1826-SM-5GZYN 111.8
GTEX-13FHP-0226-SM-5K7WD 111.5
GTEX-XV7Q-2626-SM-4BRVA 111.3
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 69.1
Samples: 227

Max RPKM: 154.6
Min RPKM: 28.6
Std RPKM: 17.8
Median RPKM: 65.4
GTEX-13X6H-1726-SM-5Q5EH 154.6
GTEX-146FH-2026-SM-5SI9I 130.8
GTEX-UPK5-1826-SM-3GAEB 122.4
GTEX-131XG-0126-SM-5K7UJ 118.8
GTEX-Y5LM-0826-SM-4VDSW 113.7
GTEX-ZZPU-0326-SM-5N9BJ 112.5
GTEX-ZVT2-0226-SM-5GIE3 111.1
GTEX-131XE-2026-SM-5LZW1 109.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

104.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 104.7
FF:10010-101C1 65,65,76 years, mixed 104.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.