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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:23.7RPKM
FANTOM5:63.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:High
 

Antibody staining

Antibody HPA031068

 

Antibody CAB024930

 

Glial cells

Not detected   Low  

Neuronal cells

Medium   High  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

23.7

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 23.7
Samples: 117

Max RPKM: 45.7
Min RPKM: 8.6
Std RPKM: 6.7
Median RPKM: 23.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 45.7
GTEX-XMD1-0011-R5A-SM-4AT47 43.8
GTEX-NL4W-0011-R5a-SM-2I3GD 38.4
GTEX-132Q8-0011-R5a-SM-5IJDM 38.0
GTEX-13NYS-0011-R5a-SM-5MR4D 37.0
GTEX-OHPN-0011-R5A-SM-2I5FF 36.8
GTEX-X585-0011-R5A-SM-46MVI 36.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 34.3
GTEX-13JUV-0011-R5a-SM-5LZY5 33.6
GTEX-QVJO-0011-R5A-SM-2S1QM 32.8
GTEX-WWYW-0011-R5A-SM-3NB3E 31.3
GTEX-N7MT-0011-R5a-SM-2I3G6 30.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 30.8
GTEX-13X6K-0011-R5b-SM-5PNUE 30.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 30.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 30.3
GTEX-13JVG-0011-R5a-SM-5MR4O 30.3
GTEX-X4XX-0011-R5A-SM-46MWN 29.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 29.0
GTEX-11H98-0011-R5b-SM-57WCF 28.9
GTEX-13OW6-0011-R5a-SM-5O9BK 28.7
GTEX-RVPV-0011-R5A-SM-2TF69 28.7
GTEX-R55E-0011-R5A-SM-2TC5N 28.4
GTEX-WZTO-0011-R5B-SM-3NMC5 28.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 28.3
GTEX-131YS-0011-R5b-SM-5K7YB 28.2
GTEX-13X6I-0011-R5a-SM-5PNWW 28.2
GTEX-12WSB-0011-R5b-SM-5GU67 27.7
GTEX-13FLV-0011-R5a-SM-5LZWT 27.6
GTEX-145LS-0011-R5a-SM-5SI65 27.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 27.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 27.6
GTEX-14BIM-0011-R5b-SM-5S2RM 27.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 27.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 27.4
GTEX-N7MS-0011-R5a-SM-2HMK8 27.1
GTEX-13G51-0011-R5a-SM-5L3EB 26.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 26.5
GTEX-144GO-0011-R5a-SM-5PNUR 26.4
GTEX-13OW5-0011-R5b-SM-5L3FR 26.3
GTEX-11GSP-0011-R5a-SM-57WBE 26.1
GTEX-NL3H-0011-R5a-SM-2I3GB 25.7
GTEX-13OVH-0011-R5b-SM-5KM4L 25.4
GTEX-13OVL-0011-R5b-SM-5L3FU 25.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 25.3
GTEX-13VXU-0011-R5a-SM-5O9D7 25.0
GTEX-12WSF-0011-R5a-SM-5HL8K 24.9
GTEX-1399T-0011-R5b-SM-5IJDK 24.9
GTEX-13FXS-0011-R5b-SM-5LZYE 24.9
GTEX-13X6J-0011-R5b-SM-5PNWT 24.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 24.7
GTEX-13FLW-0011-R5a-SM-5LZX6 24.6
GTEX-RU72-0011-R5A-SM-2TF6U 24.5
GTEX-WVLH-0011-R5A-SM-3MJFW 24.4
GTEX-145MH-0011-R5a-SM-5P9JT 24.2
GTEX-13OW7-0011-R5b-SM-5O9DM 24.1
GTEX-13SLX-0011-R5a-SM-5O9BV 24.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 24.1
GTEX-12WSA-0011-R5b-SM-5GU5I 23.8
GTEX-13O3O-0011-R5b-SM-5KM44 23.7
GTEX-139T8-0011-R5b-SM-5J1MO 23.4
GTEX-13NYB-0011-R5a-SM-5MR45 23.4
GTEX-X261-0011-R5A-SM-3NMB4 23.3
GTEX-S7SE-0011-R5A-SM-2XCDA 23.1
GTEX-T5JC-0011-R5A-SM-32PLK 23.0
GTEX-WL46-0011-R5A-SM-3LK6V 22.9
GTEX-PVOW-0011-R5A-SM-32PL7 22.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 22.6
GTEX-T6MN-0011-R5A-SM-32QPD 22.2
GTEX-13S7M-0011-R5b-SM-5P9HS 22.1
GTEX-ZUA1-0011-R5b-SM-51MTG 22.1
GTEX-14ABY-0011-R5b-SM-5SI7B 21.7
GTEX-11NV4-0011-R5a-SM-5NQ88 21.6
GTEX-1445S-0011-R5a-SM-5PNUS 21.5
GTEX-ZXG5-0011-R5b-SM-57WBN 21.3
GTEX-139TS-0011-R5b-SM-5J2MZ 21.1
GTEX-13CZV-0011-R5a-SM-5K7XA 21.1
GTEX-1313W-0011-R5b-SM-5L3EP 21.0
GTEX-139TT-0011-R5b-SM-5K7W8 20.6
GTEX-YFC4-0011-R5a-SM-4RGLR 20.4
GTEX-UTHO-0011-R5A-SM-3GIJD 20.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 20.0
GTEX-OXRN-0011-R5A-SM-2I5EF 19.9
GTEX-14BIN-0011-R5b-SM-5SI78 19.8
GTEX-TSE9-0011-R5A-SM-3DB7J 19.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 19.8
GTEX-12WSC-0011-R5b-SM-5CVNS 19.3
GTEX-11OF3-0011-R5a-SM-57WB4 19.2
GTEX-XOTO-0011-R5A-SM-4B657 19.1
GTEX-P44H-0011-R5A-SM-2XCEX 18.9
GTEX-12ZZX-0011-R5a-SM-5HL89 18.7
GTEX-ZE7O-0011-R5a-SM-57WBO 18.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 17.8
GTEX-11UD1-0011-R5b-SM-5P9FP 17.7
GTEX-13CIG-0011-R5b-SM-5L3F2 17.5
GTEX-Z93S-0011-R5b-SM-4RGNI 17.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 17.2
GTEX-ZVT3-0011-R5a-SM-51MSI 16.8
GTEX-12WSD-0011-R5b-SM-5CVNG 16.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 16.5
GTEX-144GL-0011-R5b-SM-5PNUJ 16.2
GTEX-13FHP-0011-R5b-SM-5LZY2 16.1
GTEX-ZV68-0011-R5a-SM-4YCDW 16.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 15.9
GTEX-T2IS-0011-R5A-SM-32QP4 15.9
GTEX-NPJ7-0011-R5a-SM-33HBK 15.8
GTEX-13112-0011-R5b-SM-5DUV8 15.6
GTEX-QMR6-0011-R5A-SM-32PKT 15.5
GTEX-11WQC-0011-R5a-SM-5BC74 14.5
GTEX-13CF2-0011-R5a-SM-5LZWS 14.4
GTEX-RVPU-0011-R5A-SM-2XCAD 14.0
GTEX-1477Z-0011-R5b-SM-5PNUO 13.8
GTEX-S7PM-0011-R5A-SM-3NM8G 12.3
GTEX-13NZA-0011-R5b-SM-5KM4K 11.7
GTEX-YJ89-0011-R5a-SM-4V6GM 11.6
GTEX-12WSH-0011-R5b-SM-5P9F3 8.6
GTEX-145MG-0011-R5b-SM-5S2VU 8.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

63.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 63.6
FF:10164-103B2 76 years, female 72.2
FF:10379-105H1 89 years, female 55.0

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