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TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:50.5TPM
GTEx:39.1RPKM
FANTOM5:132.8Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:High
 

Antibody staining

Antibody HPA031068

 

Antibody CAB024930

 

Bile duct cells

Not detected   Medium  

Hepatocytes

Medium   High  
   
   
   

LIVER - HPA RNA-seq

Average TPM

50.5

N/A Female, age 60
Sample 1
TPM: 59.0
overview Male, age 54
Sample 2
TPM: 55.9
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 52.8
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 35.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 32.8
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 63.4
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 49.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 41.9
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 34.4
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 79.3
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

39.1

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 39.1
Samples: 119

Max RPKM: 176.5
Min RPKM: 7
Std RPKM: 25.6
Median RPKM: 31.4
GTEX-13N11-0926-SM-5IJG2 176.5
GTEX-Q734-0326-SM-48U15 125.7
GTEX-QDVN-0826-SM-48TZ2 114.1
GTEX-Y5LM-0426-SM-4VBRO 92.2
GTEX-S32W-1926-SM-4AD63 88.5
GTEX-YB5E-0326-SM-5IFHU 86.7
GTEX-VUSG-0126-SM-4KL1X 82.7
GTEX-13FTW-1126-SM-5J2NV 82.1
GTEX-QEL4-1226-SM-447A4 81.3
GTEX-11EQ9-0526-SM-5A5JZ 75.5
GTEX-WFON-1726-SM-4LVMQ 75.0
GTEX-R53T-0326-SM-48FEC 73.2
GTEX-S4Z8-0526-SM-4AD4T 71.8
GTEX-139YR-0226-SM-5IFEM 64.7
GTEX-WYVS-1926-SM-4PQZ2 62.6
GTEX-11DXZ-0126-SM-5EGGY 62.0
GTEX-ZTPG-1426-SM-51MT3 62.0
GTEX-146FH-1526-SM-5NQBU 61.9
GTEX-13NZ9-1326-SM-5MR3V 61.8
GTEX-ZF2S-3026-SM-4WWCH 60.8
GTEX-1399R-1226-SM-5P9GF 59.3
GTEX-ZAB5-0426-SM-5CVMI 57.3
GTEX-13113-1326-SM-5GCOI 57.1
GTEX-ZZPU-0426-SM-5GZYH 56.5
GTEX-13SLX-1226-SM-5S2Q6 55.5
GTEX-UPK5-1426-SM-4JBHH 52.5
GTEX-1497J-0726-SM-5Q5D1 51.7
GTEX-131XE-0326-SM-5LZVO 51.3
GTEX-ZYY3-0626-SM-5NQ6W 51.3
GTEX-OOBJ-0826-SM-3NB2K 49.9
GTEX-12WSG-0626-SM-5FQTQ 49.5
GTEX-ZVP2-0626-SM-51MSO 49.5
GTEX-ZPU1-0826-SM-57WG2 49.2
GTEX-ZF29-2026-SM-4WWB7 48.2
GTEX-12WSL-0226-SM-5CVMJ 48.0
GTEX-Z9EW-0426-SM-5CVM9 47.3
GTEX-QV44-0326-SM-4R1KD 47.2
GTEX-WQUQ-1926-SM-4OOSA 45.0
GTEX-X3Y1-2726-SM-4PQZH 42.9
GTEX-UPIC-0926-SM-4IHLV 42.8
GTEX-13FLV-0326-SM-5N9DJ 42.3
GTEX-P78B-1326-SM-3P611 42.2
GTEX-1212Z-0226-SM-59HLF 41.8
GTEX-S33H-1626-SM-4AD68 41.8
GTEX-RM2N-1926-SM-48FCU 41.2
GTEX-14E1K-0326-SM-5S2PE 40.3
GTEX-U3ZN-0226-SM-3DB8D 38.5
GTEX-132NY-0926-SM-5P9G3 38.1
GTEX-14DAQ-1726-SM-5S2R2 38.1
GTEX-YEC4-0826-SM-5P9FV 38.0
GTEX-PX3G-0826-SM-48TZS 36.9
GTEX-X4EP-1026-SM-4QAS5 36.9
GTEX-TKQ2-1726-SM-4DXUP 36.5
GTEX-144GM-1326-SM-5LU5E 35.3
GTEX-UTHO-2426-SM-4JBHD 34.8
GTEX-12WSD-1426-SM-5GCN9 34.3
GTEX-139TU-0826-SM-5IJFG 32.8
GTEX-12WSI-0226-SM-5GCNA 32.6
GTEX-QESD-2026-SM-447BI 31.5
GTEX-13PVR-0126-SM-5S2PY 31.4
GTEX-147JS-1126-SM-5RQIW 31.0
GTEX-1399T-0826-SM-5IFES 30.7
GTEX-REY6-1226-SM-48FDR 30.6
GTEX-XOTO-0826-SM-4B65O 30.4
GTEX-145MF-0826-SM-5QGQA 30.0
GTEX-14AS3-0126-SM-5Q5F4 29.7
GTEX-Y5V5-0926-SM-4VBPZ 29.4
GTEX-14C38-1526-SM-5RQJ7 29.3
GTEX-12KS4-1326-SM-5LUB3 29.1
GTEX-11GSP-0626-SM-5986T 29.0
GTEX-139TS-1426-SM-5IFJD 28.9
GTEX-13OW6-2626-SM-5IFF2 27.7
GTEX-ZAB4-0826-SM-5LU9D 27.4
GTEX-ZYT6-0626-SM-5E45V 26.1
GTEX-14753-1626-SM-5NQ9L 25.1
GTEX-ZVT3-1626-SM-5GU66 24.6
GTEX-12696-0826-SM-5EGGE 24.0
GTEX-X4XY-1626-SM-46MVN 23.6
GTEX-1269C-0626-SM-5FQSS 23.4
GTEX-11OF3-0726-SM-5BC4Z 22.7
GTEX-13N2G-0926-SM-5IFGJ 22.7
GTEX-X261-1726-SM-4PQYT 22.5
GTEX-11DXY-0526-SM-5EGGQ 22.3
GTEX-RU72-1426-SM-46MUF 22.3
GTEX-11WQC-0726-SM-5EQMR 21.9
GTEX-145MO-2326-SM-5NQ9K 21.9
GTEX-QEG4-1826-SM-4R1JN 21.7
GTEX-11ZTS-1426-SM-5EQMM 21.5
GTEX-RTLS-1326-SM-46MUN 20.7
GTEX-XBEC-1526-SM-4AT68 20.6
GTEX-YFC4-1526-SM-5IFJS 20.0
GTEX-131XH-0626-SM-5LZWH 19.4
GTEX-147F4-1426-SM-5LUA8 19.4
GTEX-SJXC-1226-SM-4DM78 19.2
GTEX-ZVT4-0626-SM-5E45T 19.2
GTEX-14A5I-1726-SM-5QGQ5 18.7
GTEX-13NYB-1026-SM-5IFH3 18.3
GTEX-131YS-1626-SM-5HL6C 18.1
GTEX-RN64-1826-SM-48FDV 17.9
GTEX-13NZB-0626-SM-5IFH6 17.7
GTEX-11NUK-1226-SM-5P9GM 17.3
GTEX-YECK-1926-SM-4W21H 17.2
GTEX-13VXU-0926-SM-5IFFH 17.1
GTEX-11ZVC-0726-SM-5FQT9 17.0
GTEX-X4EO-1126-SM-4QARQ 16.9
GTEX-T6MN-1226-SM-3NMA5 16.7
GTEX-Q2AG-1126-SM-48U1P 16.5
GTEX-RNOR-1426-SM-48FDJ 16.4
GTEX-13QJC-0726-SM-5RQJK 16.3
GTEX-WZTO-0626-SM-4PQYY 15.3
GTEX-13112-1426-SM-5EGH8 15.2
GTEX-RWSA-1426-SM-47JXA 15.1
GTEX-145LU-1326-SM-5LU9N 14.9
GTEX-12WSM-0726-SM-5GCOW 14.5
GTEX-11NV4-1326-SM-5HL6V 13.5
GTEX-13FTZ-0726-SM-5IFFY 11.8
GTEX-11ZUS-2526-SM-59872 11.3
GTEX-13O3O-1826-SM-5IFGW 9.0
GTEX-12ZZZ-1326-SM-59HKW 7.0
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

132.8

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 132.8
FF:10018-101C9 64,69,70 years, mixed 132.8

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