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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:115.9TPM
GTEx:107.9RPKM
FANTOM5:199.3Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA031068

 

Antibody CAB024930

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

115.9

overview Male, age 65
Sample 1
TPM: 98.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 156.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 95.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 113.9

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

107.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 107.9
Samples: 88

Max RPKM: 306.9
Min RPKM: 34.2
Std RPKM: 44.2
Median RPKM: 99
GTEX-ZYFG-2026-SM-5E43Y 306.9
GTEX-111YS-1426-SM-5GID8 216.0
GTEX-YEC4-1726-SM-4W21E 202.5
GTEX-YB5E-1526-SM-5IFIE 200.7
GTEX-13FTW-2026-SM-5IJE2 186.3
GTEX-ZZ64-0526-SM-5GZXM 179.9
GTEX-ZLV1-1126-SM-4WWBW 177.0
GTEX-ZXES-1526-SM-5NQ95 173.2
GTEX-145LT-1026-SM-5LU9O 168.9
GTEX-ZTX8-0526-SM-59HLD 163.9
GTEX-WFG8-1626-SM-4LVMB 162.2
GTEX-11P7K-1626-SM-5GU63 158.5
GTEX-ZVZP-1826-SM-5GZXB 148.2
GTEX-Y5LM-1626-SM-4VDTB 144.5
GTEX-WFJO-0926-SM-4LVM2 143.3
GTEX-13D11-0726-SM-5LZZB 140.8
GTEX-XXEK-1026-SM-4BRUW 137.9
GTEX-14DAR-1426-SM-5RQIR 137.2
GTEX-13113-1226-SM-5EGHT 135.6
GTEX-XGQ4-1326-SM-4GIDU 133.9
GTEX-ZTSS-0926-SM-59865 132.4
GTEX-ZTPG-2626-SM-57WFX 130.0
GTEX-1122O-1326-SM-5H11F 127.5
GTEX-11DXX-1626-SM-5H11H 125.0
GTEX-XUZC-1426-SM-4BRV3 124.0
GTEX-131XF-1326-SM-5GCMQ 122.3
GTEX-X5EB-1626-SM-4E3IV 121.8
GTEX-XBED-1426-SM-4AT4G 118.6
GTEX-Y9LG-1626-SM-5IFHM 118.2
GTEX-ZPIC-2326-SM-57WDW 117.8
GTEX-11EQ9-1326-SM-5985X 117.8
GTEX-ZVT2-2126-SM-5NQ93 115.1
GTEX-ZPCL-1726-SM-57WEO 114.7
GTEX-14E6E-1626-SM-5RQI7 114.2
GTEX-X15G-1426-SM-4PQZK 111.6
GTEX-13PL7-2626-SM-5IFH4 110.2
GTEX-13O61-1326-SM-5KM31 109.2
GTEX-1399S-2026-SM-5KM4B 109.2
GTEX-11P82-0826-SM-5P9GU 107.3
GTEX-XAJ8-0526-SM-47JYK 105.4
GTEX-ZYWO-1526-SM-5SIAL 104.7
GTEX-YF7O-1826-SM-5IFIU 103.7
GTEX-13FH7-1226-SM-5IJFK 102.4
GTEX-ZVP2-1726-SM-5GU5P 99.3
GTEX-ZA64-1226-SM-5HL7B 98.7
GTEX-139T6-1026-SM-5IJGC 98.6
GTEX-111CU-1326-SM-5NQ8L 97.4
GTEX-139YR-2226-SM-5IFFW 96.6
GTEX-131XG-1726-SM-5LZUR 96.2
GTEX-ZLFU-1526-SM-4WWBT 95.1
GTEX-WFG7-1726-SM-4LVME 94.7
GTEX-11XUK-1426-SM-5EQMG 94.0
GTEX-Z9EW-0926-SM-5CVMM 92.3
GTEX-11I78-1126-SM-5A5K5 91.4
GTEX-133LE-1426-SM-5IFH1 90.5
GTEX-XMK1-1826-SM-4B66F 87.3
GTEX-VJYA-0926-SM-4KL1N 85.7
GTEX-11DXZ-1326-SM-5H11X 85.4
GTEX-11NSD-1726-SM-5N9C3 85.4
GTEX-WH7G-1626-SM-4LVMY 85.2
GTEX-13CF3-1226-SM-5LZXN 84.9
GTEX-ZEX8-1826-SM-57WBH 84.0
GTEX-11VI4-1626-SM-5EQKO 82.2
GTEX-WQUQ-2426-SM-4MVNW 81.0
GTEX-12BJ1-1926-SM-5HL9Z 80.8
GTEX-Y114-1426-SM-4TT6W 80.4
GTEX-ZP4G-1626-SM-57WGD 76.5
GTEX-VUSG-1726-SM-4KKZL 74.7
GTEX-1399U-2126-SM-5IFEZ 74.2
GTEX-WRHK-1026-SM-4MVOD 72.2
GTEX-13O21-1026-SM-5IJDU 69.3
GTEX-145ME-0926-SM-5O9AR 69.3
GTEX-1399R-2026-SM-5K7WN 69.2
GTEX-117YX-0326-SM-5GICL 68.2
GTEX-13RTK-0826-SM-5Q5C6 67.3
GTEX-ZQG8-2526-SM-57WEQ 66.5
GTEX-13QBU-1926-SM-5IJEW 65.5
GTEX-UPK5-2026-SM-4JBIM 63.8
GTEX-1192X-2526-SM-59868 63.3
GTEX-Y3IK-1726-SM-4YCCR 62.9
GTEX-13111-1426-SM-5DUW3 61.5
GTEX-ZC5H-2326-SM-4WAYT 56.8
GTEX-ZF2S-1726-SM-57WFT 52.9
GTEX-WEY5-1526-SM-4LMJF 50.7
GTEX-12WSK-1526-SM-5CVNO 46.7
GTEX-13OVI-1926-SM-5IJCG 41.6
GTEX-ZQUD-0926-SM-57WE3 40.6
GTEX-148VJ-2226-SM-5NQ9M 34.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

199.3

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 199.3
FF:10024-101D6 15,40,85 years, mixed 199.3

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