Fields »
ABOUT
HELP
BLOG
SBNO2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.1TPM
GTEx:30.6RPKM
FANTOM5:82.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA041867

  

Adipocytes

 Low  

Chondrocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
 
 
 

Antibody staining

Antibody HPA041867

  

Adipocytes

 Not detected  

Fibroblasts

 Low  
    
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

14.1
N/A Female, age 80
Sample 1
TPM: 30.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 9.4
N/A Female, age 57
Sample 3
TPM: 7.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 9.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 14.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

30.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 24.8
Samples: 350

Max RPKM: 100.8
Min RPKM: 7.9
Std RPKM: 14.2
Median RPKM: 20.5
GTEX-ZYFD-0226-SM-5NQ86 100.8
GTEX-144GM-1926-SM-5LUAN 100.7
GTEX-U8XE-0426-SM-3DB91 89.9
GTEX-OXRO-0226-SM-3LK6F 88.2
GTEX-11UD2-0126-SM-5EQL2 85.3
GTEX-QESD-1526-SM-2S1QT 77.2
GTEX-X8HC-0226-SM-4E3K1 75.0
GTEX-YJ8A-0526-SM-5IFHT 72.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 39.5
Samples: 227

Max RPKM: 116.8
Min RPKM: 12.2
Std RPKM: 22.5
Median RPKM: 32
GTEX-Y114-1326-SM-4TT9A 116.8
GTEX-13IVO-2426-SM-5K7V9 113.0
GTEX-ZTSS-1026-SM-5985N 109.1
GTEX-13QBU-1326-SM-5LU4K 103.3
GTEX-13PVR-0526-SM-5S2OB 96.4
GTEX-ZXES-0926-SM-5E43O 95.3
GTEX-11EM3-1126-SM-5A5KM 92.0
GTEX-13JUV-0626-SM-5J1MQ 88.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

82.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 82.3
FF:10010-101C1 65,65,76 years, mixed 82.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.