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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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COL17A1
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA043673

 

Antibody HPA052963

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA043673   HPA052963  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

9   13  

References

1    

VALIDATION SUMMARY

 
 

Antibody HPA043673

 

Antibody HPA052963

 
Immunohistochemistry

Supported   Supported  
Western blot

Uncertain   Uncertain  
Protein array

Supported   Supported  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA043673

 

Antibody HPA052963

 

Standard validation

Supported   Supported  

   

Figure description

Immunohistochemical staining of human skin shows strong positivity in keratinocytes.   Immunohistochemical staining of human colon shows moderate cytoplasmic positivity in glandular cells.  

Expression

RNA: detected in 23 tissues
Protein: detected in 20 cell types
  RNA: detected in 23 tissues
Protein: detected in 44 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:800   1:15  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA043673

 

Antibody HPA052963

 

Standard validation

Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
 

   

Figure description

  Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

150.4, 142.3, 44.1   150.4, 142.3, 44.1  

Antibody dilution

1:250   1:160  

PROTEIN ARRAY

 
 

Antibody HPA043673

 

Antibody HPA052963

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:6000   1:1250  

ANTIGEN INFORMATION

 
 

Antibody HPA043673

 

Antibody HPA052963

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

97   90  

Antigen sequence

DGTEVTERIVTETVTTRLTSLPPKGGTSNGYAKTASLGGGSRLEKQSLTH
GSSGYINSTGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTR
 
NLPSHVWSSTLPAGSSMGTYHNNMTTQSSSLLNTNAYSAGSVFGVPNNMA
SCSPTLHPGLSTSSSVFGMQNNLAPSLTTLSHGTTTTSTA
 

Matching transcripts

COL17A1-001 - ENSP00000340937 [100%]
COL17A1-003 - ENSP00000358748 [100%]
COL17A1-007 - ENSP00000376905 [100%]
  COL17A1-001 - ENSP00000340937 [100%]
COL17A1-003 - ENSP00000358748 [100%]
COL17A1-007 - ENSP00000376905 [100%]
 

Other gene match

   
ANTIGEN VIEW
COL17A1-001
COL17A1-003
COL17A1-007

RELEVANT PUBLICATIONS

 
 

Antibody HPA043673

 

Antibody HPA052963

 

1.

Dual roles of hemidesmosomal proteins in the pancreatic epithelium: the phosphoinositide 3-kinase decides
Laval S et al
Oncogene 2014;33(15):1934-44
   
 

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