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SMARCD1
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TISSUE ATLAS PRIMARY DATA CEREBELLUM

GENE/PROTEIN

Antibody validation


Dictionary

Cerebellum

CEREBELLUM - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:19.6RPKM
FANTOM5:40.0Tags Per Million

CEREBELLUM - Annotated protein expression

Annotated protein
expression

Cells in granular layer:High
Cells in molecular layer:High
Purkinje cells:High
 

Antibody staining

Antibody HPA004101

 

Cells in granular layer

High  

Cells in molecular layer

High  

Purkinje cells

High  
 
 
 

CEREBELLUM - HPA RNA-seq

Pending HPA RNA-seq analysis


CEREBELLUM - GTEx RNA-seq

Average RPKM

19.6

GTEx sample id

RPKM

 

Brain - Cerebellar Hemisphere

Brain - Cerebellar Hemisphere
RPKM: 18.8
Samples: 105

Max RPKM: 24.9
Min RPKM: 11.4
Std RPKM: 2.5
Median RPKM: 18.7
GTEX-P44H-0011-R11A-SM-2XCER 24.9
GTEX-13FHO-0011-R11b-SM-5LZYQ 24.5
GTEX-X4EP-0011-R11B-SM-4QASK 24.3
GTEX-13SLW-0011-R11a-SM-5SI8Q 22.9
GTEX-13G51-0011-R11b-SM-5J2NE 22.7
GTEX-144GL-0011-R11b-SM-5P9F6 22.7
GTEX-139TT-0011-R11b-SM-5LZV1 22.6
GTEX-13FLV-0011-R11a-SM-5LZZ7 22.5
GTEX-132Q8-0011-R11b-SM-5DUW9 22.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 22.3
GTEX-14ABY-0011-R11a-SM-5SI7C 22.2
GTEX-13FHP-0011-R11b-SM-5LZXP 22.0
GTEX-N7MS-0011-R11A-SM-2HMJS 22.0
GTEX-QMR6-0011-R11A-SM-32PKK 21.9
GTEX-S7SE-0011-R11A-SM-2XCDD 21.9
GTEX-ZE7O-0011-R11a-SM-57WBC 21.9
GTEX-WHSE-0011-R11A-SM-3P5YY 21.8
GTEX-YJ89-0011-R11a-SM-4SOKA 21.7
GTEX-11WQC-0011-R11b-SM-57WD6 21.6
GTEX-12WSH-0011-R11a-SM-5LZVM 21.2
GTEX-NL4W-0011-R11A-SM-2I3DW 20.9
GTEX-13JVG-0011-R11a-SM-5KM53 20.8
GTEX-13NZA-0011-R11b-SM-5KM4W 20.8
GTEX-ZVT3-0011-R11b-SM-57WBI 20.8
GTEX-11GSP-0011-R11b-SM-5NQ7V 20.7
GTEX-13CF2-0011-R11b-SM-5LZXO 20.7
GTEX-13OW6-0011-R11a-SM-5L3H2 20.7
GTEX-13O3O-0011-R11b-SM-5KM4G 20.6
GTEX-11H98-0011-R11b-SM-5NQ6U 20.5
GTEX-11OF3-0011-R11a-SM-57WCR 20.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20.2
GTEX-ZDXO-0011-R11a-SM-4WWD9 20.2
GTEX-13QIC-0011-R11b-SM-5O9BU 20.1
GTEX-13FXS-0011-R11a-SM-5L3DM 19.9
GTEX-13OVH-0011-R11b-SM-5KM4X 19.9
GTEX-13VXU-0011-R11b-SM-5O9DJ 19.8
GTEX-145MI-0011-R11a-SM-5P9JZ 19.8
GTEX-13X6K-0011-R11a-SM-5P9F5 19.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 19.4
GTEX-13SLX-0011-R11b-SM-5O9C8 19.4
GTEX-14BIN-0011-R11a-SM-5SI79 19.4
GTEX-12WSB-0011-R11b-SM-57WBJ 19.3
GTEX-145LU-0011-R11b-SM-5P9JX 19.2
GTEX-1399T-0011-R11a-SM-5J2O1 19.1
GTEX-13FTY-0011-R11a-SM-5IJEA 19.1
GTEX-QDT8-0011-R11A-SM-32PKD 19.0
GTEX-1313W-0011-R11a-SM-5DUXN 18.9
GTEX-X4XX-0011-R11A-SM-46MWQ 18.9
GTEX-ZUA1-0011-R11b-SM-51MTI 18.9
GTEX-13S7M-0011-R11b-SM-5P9HU 18.8
GTEX-12WSF-0011-R11a-SM-5LZVT 18.7
GTEX-13O3Q-0011-R11b-SM-5KM2W 18.7
GTEX-13OW7-0011-R11a-SM-5O9DY 18.7
GTEX-X261-0011-R11A-SM-4E3JY 18.6
GTEX-13NYS-0011-R11b-SM-5MR4P 18.5
GTEX-13X6I-0011-R11a-SM-5P9HN 18.5
GTEX-ZAB4-0011-R11a-SM-4SOKI 18.5
GTEX-131YS-0011-R11b-SM-5EGLM 18.4
GTEX-NPJ7-0011-R11A-SM-2I3E8 18.4
GTEX-WVLH-0011-R11A-SM-3MJFO 18.4
GTEX-13OVL-0011-R11b-SM-5L3G7 18.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 18.2
GTEX-WZTO-0011-R11A-SM-4E3K9 18.2
GTEX-YFC4-0011-R11a-SM-4SOK6 18.1
GTEX-NL3H-0011-R11A-SM-2I3E6 18.0
GTEX-Z93S-0011-R11a-SM-4RGNN 18.0
GTEX-13CZV-0011-R11b-SM-5N9FN 17.9
GTEX-145MH-0011-R11a-SM-5P9HQ 17.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 17.8
GTEX-13X6J-0011-R11a-SM-5P9HE 17.7
GTEX-13JUV-0011-R11a-SM-5LZYH 17.6
GTEX-13OW8-0011-R11a-SM-5L3GT 17.6
GTEX-R55E-0011-R11A-SM-2TC6I 17.5
GTEX-T6MN-0011-R11A-SM-32QOX 17.5
GTEX-12WSI-0011-R11b-SM-5P9EZ 17.4
GTEX-UTHO-0011-R11A-SM-3GIJE 17.4
GTEX-XOTO-0011-R11B-SM-4B64O 17.4
GTEX-13N2G-0011-R11a-SM-5MR3F 17.3
GTEX-OHPN-0011-R11A-SM-2I5FM 17.3
GTEX-T5JC-0011-R11A-SM-32PMB 17.3
GTEX-Y8DK-0011-R11A-SM-4SOK2 17.3
GTEX-12126-0011-R11a-SM-5BC6X 17.1
GTEX-12ZZZ-0011-R11a-SM-5EGLC 17.0
GTEX-RU72-0011-R11A-SM-5SI8G 17.0
GTEX-12ZZX-0011-R11a-SM-5DUVJ 16.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 16.9
GTEX-Q2AG-0011-R11A-SM-2HMKZ 16.9
GTEX-WWYW-0011-R11A-SM-3NB38 16.9
GTEX-12WSM-0011-R11a-SM-5DUX8 16.7
GTEX-RVPV-0011-R11A-SM-2TF6F 16.6
GTEX-T2IS-0011-R11A-SM-32QPC 16.5
GTEX-XMD1-0011-R11A-SM-4AT5J 16.3
GTEX-139UW-0011-R11a-SM-5IJGN 16.1
GTEX-13PLJ-0011-R11b-SM-5O9BS 16.1
GTEX-14BIM-0011-R11b-SM-5S2RN 15.7
GTEX-WL46-0011-R11A-SM-3MJFT 15.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 15.3
GTEX-TSE9-0011-R11A-SM-3DB7N 14.9
GTEX-131XH-0011-R11a-SM-5EGLN 14.3
GTEX-13OW5-0011-R11b-SM-5L3GG 13.7
GTEX-X585-0011-R11B-SM-46MUZ 13.6
GTEX-11ZUS-0011-R11b-SM-5BC7B 13.3
GTEX-131XW-0011-R11a-SM-5DUV9 13.0
GTEX-12WSC-0011-R11a-SM-5GU5J 12.8
GTEX-ZF28-0011-R11a-SM-4WWEI 11.4
Show all
 

Brain - Cerebellum

Brain - Cerebellum
RPKM: 20.2
Samples: 125

Max RPKM: 33.4
Min RPKM: 10.4
Std RPKM: 2.4
Median RPKM: 20.3
GTEX-X4EP-3026-SM-3P5YP 33.4
GTEX-XLM4-2926-SM-4AT59 24.9
GTEX-13FHO-2926-SM-5L3ES 24.8
GTEX-11DXW-1026-SM-5H11K 24.7
GTEX-P44H-2426-SM-2XCEJ 24.7
GTEX-QDT8-3026-SM-32PKB 24.6
GTEX-WHSE-2926-SM-3NMBG 24.1
GTEX-147F4-3026-SM-5Q5BJ 23.9
GTEX-13CF2-3026-SM-5IFFX 23.8
GTEX-QVUS-2926-SM-3GIJB 23.6
GTEX-13FHP-2926-SM-5IJG9 23.4
GTEX-13G51-3126-SM-5IJG7 23.4
GTEX-ZAK1-2926-SM-5HL9S 23.4
GTEX-QMR6-1326-SM-32PLB 23.3
GTEX-11PRG-2826-SM-5BC54 22.9
GTEX-S7SE-2526-SM-2XCDL 22.8
GTEX-13QIC-3026-SM-5LU58 22.6
GTEX-ZVT3-2926-SM-5GU6M 22.5
GTEX-12ZZZ-3126-SM-5LZU6 22.4
GTEX-14E7W-2926-SM-5S2R8 22.2
GTEX-131YS-3026-SM-5EGHY 21.9
GTEX-YJ89-2926-SM-5P9IT 21.9
GTEX-12WSM-2126-SM-5GCOC 21.8
GTEX-WVLH-2926-SM-3MJG5 21.8
GTEX-11NV4-2226-SM-5BC4T 21.7
GTEX-13OW6-2926-SM-5KM29 21.7
GTEX-YFC4-3026-SM-5IFJK 21.7
GTEX-144GL-2926-SM-5O99F 21.6
GTEX-R55E-2526-SM-2TC6H 21.5
GTEX-13O3O-3026-SM-5KM42 21.3
GTEX-111FC-3326-SM-5GZYV 21.1
GTEX-11DXY-3126-SM-5N9BT 21.1
GTEX-1399T-3126-SM-5IJFS 21.1
GTEX-13JVG-3226-SM-5IJGJ 21.1
GTEX-13VXU-3026-SM-5LU3K 21.1
GTEX-1313W-3026-SM-5LZUZ 21.0
GTEX-11DYG-2926-SM-5H132 20.9
GTEX-11GSP-3126-SM-5A5LL 20.9
GTEX-13O3Q-3026-SM-5IJGD 20.9
GTEX-14C5O-2926-SM-5RQI1 20.9
GTEX-PWO3-1026-SM-2I5F2 20.9
GTEX-12WSE-2926-SM-5RQJ9 20.8
GTEX-13OW7-2926-SM-5MR3Z 20.8
GTEX-QVJO-1325-SM-2S1QX 20.8
GTEX-R55F-1226-SM-2TF59 20.8
GTEX-11EMC-3326-SM-5P9JH 20.7
GTEX-12WSD-3026-SM-5LZU7 20.7
GTEX-132Q8-2926-SM-5IFFP 20.7
GTEX-14BIN-3326-SM-5Q5E6 20.7
GTEX-Q2AG-2826-SM-2HMJQ 20.7
GTEX-1192X-3226-SM-5987D 20.6
GTEX-11ONC-3026-SM-5985W 20.6
GTEX-13NYB-3226-SM-5J2ND 20.6
GTEX-13RTJ-3126-SM-5S2Q4 20.6
GTEX-X261-3126-SM-4PQZC 20.6
GTEX-ZUA1-2926-SM-59HL3 20.6
GTEX-13OVJ-2726-SM-5IJG6 20.5
GTEX-Y8DK-0726-SM-4TT3S 20.5
GTEX-11NUK-3026-SM-5986K 20.4
GTEX-13X6K-2826-SM-5O9DS 20.4
GTEX-13OVL-3026-SM-5IJF1 20.3
GTEX-13PVQ-2926-SM-5L3HJ 20.3
GTEX-145MG-3126-SM-5Q5D3 20.3
GTEX-T6MN-2526-SM-32PMN 20.3
GTEX-Z93S-2826-SM-57WBL 20.3
GTEX-11TTK-2826-SM-5GU5K 20.2
GTEX-139TS-3126-SM-5LZWX 20.2
GTEX-X4XX-2926-SM-3NMB1 20.2
GTEX-13S7M-3026-SM-5S2QQ 20.1
GTEX-12WSH-3126-SM-5LZW8 20.0
GTEX-11EI6-2926-SM-5985U 19.9
GTEX-13OVH-2926-SM-5IJFH 19.8
GTEX-ZAJG-3026-SM-5HL92 19.8
GTEX-12126-0926-SM-5FQTW 19.7
GTEX-131XH-2926-SM-5LZU4 19.7
GTEX-139TT-2626-SM-5LZUB 19.7
GTEX-13OW8-2926-SM-5L3FV 19.7
GTEX-13X6I-2926-SM-5Q5C3 19.7
GTEX-UTHO-2926-SM-3P5Z9 19.7
GTEX-14DAQ-3026-SM-5S2QZ 19.6
GTEX-XOTO-2926-SM-4B65G 19.6
GTEX-12ZZY-2926-SM-5DUXO 19.5
GTEX-11GSO-3026-SM-5Q5AL 19.4
GTEX-117XS-3126-SM-5GIDP 19.3
GTEX-N7MT-1226-SM-2D7W4 19.3
GTEX-WZTO-2826-SM-3NM8P 19.3
GTEX-N7MS-2526-SM-2D7W3 19.2
GTEX-ZAB4-2926-SM-57WCV 19.2
GTEX-11ZTS-3226-SM-5EGID 19.1
GTEX-14ASI-2926-SM-5Q5DG 19.0
GTEX-12WSB-3026-SM-59HKM 18.9
GTEX-13112-2926-SM-5DUWT 18.9
GTEX-13FXS-3026-SM-5LZYO 18.9
GTEX-145LU-2626-SM-5LU9Z 18.9
GTEX-12WSC-2926-SM-5BC5Z 18.8
GTEX-NPJ7-2826-SM-2I3FU 18.8
GTEX-T2IS-2926-SM-32QPO 18.8
GTEX-1128S-2826-SM-5N9DI 18.5
GTEX-11ZUS-2826-SM-5EQKW 18.5
GTEX-ZYY3-3026-SM-5GIEJ 18.5
GTEX-RNOR-2226-SM-2TF5O 18.4
GTEX-WL46-2826-SM-3LK81 18.4
GTEX-13N2G-3126-SM-5IJGL 18.2
GTEX-Y111-2826-SM-4TT3O 18.2
GTEX-145LS-3026-SM-5O99S 18.0
GTEX-ZZPT-2926-SM-5EQ5S 18.0
GTEX-11O72-2826-SM-5HL6W 17.7
GTEX-T5JC-2326-SM-32PMR 17.7
GTEX-14A5I-2826-SM-5SIBF 17.5
GTEX-PVOW-2626-SM-32PL8 17.5
GTEX-11ZVC-3026-SM-59HJM 17.4
GTEX-NPJ8-2626-SM-2D7W2 17.4
GTEX-13JUV-3026-SM-5K7WX 17.3
GTEX-TSE9-2926-SM-3DB77 17.2
GTEX-XMD1-2826-SM-4AT5F 17.2
GTEX-11DZ1-2926-SM-5A5KI 17.1
GTEX-1269C-3126-SM-5EGI6 17.1
GTEX-145MH-2926-SM-5Q5D2 17.0
GTEX-ZYFD-2926-SM-5GID9 17.0
GTEX-14BIM-3126-SM-5Q5C7 16.9
GTEX-WWYW-3026-SM-3NB36 16.8
GTEX-12ZZX-2826-SM-5BC6K 16.6
GTEX-13OW5-3126-SM-5MR3Y 15.5
GTEX-RU72-2926-SM-2TF66 15.3
GTEX-11OF3-3126-SM-5GU5E 10.4
Show all

CEREBELLUM - FANTOM5 CAGE

Average Tags Per Million

40.0

FANTOM5 sample id

Sample description

Tags Per Million

Cerebellum
Tags Per Million: 40.0
FF:10166-103B4 76 years, female 49.7
FF:10083-102B2 22-68 years, mixed 30.3

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