Tissue expression of SMARCD1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	43.4	TPM
GTEx:	11.5	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	High
Neuronal cells:	High
Neuropil:	Medium

Antibody staining	Antibody HPA004101
Endothelial cells	Low
Glial cells	High
Neuronal cells	High
Neuropil	Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	43.4

Male, age 5

Sample 1
TPM: 31.0

Female, age 40

Sample 2
TPM: 63.1

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 36.0

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	11.5

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 12.6

Samples: 114

Max RPKM: 19.6
Min RPKM: 6.1
Std RPKM: 2
Median RPKM: 12.5

GTEX-11OF3-2926-SM-5HL78

19.6

GTEX-QDT8-2926-SM-32PKC

17.5

GTEX-QMR6-1426-SM-32PLA

17.0

GTEX-13FXS-3126-SM-5J2NN

16.5

GTEX-13PVQ-3026-SM-5SI93

16.1

GTEX-UTHO-3026-SM-3GAFB

15.9

GTEX-ZVT3-3026-SM-5E43N

15.9

GTEX-QVUS-2826-SM-3GADB

15.8

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 10.4

Samples: 108

Max RPKM: 18.9
Min RPKM: 4.8
Std RPKM: 2.2
Median RPKM: 10.3

GTEX-13N2G-0011-R10a-SM-5MR34

18.9

GTEX-X4EP-0011-R10B-SM-4QASJ

14.9

GTEX-QDT8-0011-R10A-SM-32PKG

14.6

GTEX-13CZV-0011-R10b-SM-5LZYD

14.4

GTEX-NPJ7-0011-R10A-SM-2I3E5

14.4

GTEX-NPJ8-0011-R10A-SM-2YUMO

13.8

GTEX-QMR6-0011-R10A-SM-32PKO

13.8

GTEX-13N1W-0011-R10b-SM-5MR4H

13.6

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue