Tissue expression of SMARCD1 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	22.8	TPM
GTEx:	14.3	RPKM
FANTOM5:	28.3	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

Medium

Antibody staining	Antibody HPA004101
Squamous epithelial cells	Medium

ESOPHAGUS - HPA RNA-seq

Average TPM	22.8

Female, age 70

Sample 1
TPM: 22.5

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 21.6

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 24.4

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	14.3

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 14.3

Samples: 286

Max RPKM: 29.1
Min RPKM: 8
Std RPKM: 3.6
Median RPKM: 13.4

GTEX-13PVQ-1726-SM-5IFF3

29.1

GTEX-13O1R-1326-SM-5IJF5

27.8

GTEX-WK11-1026-SM-4OOS8

26.1

GTEX-12ZZW-1726-SM-5DUVD

25.7

GTEX-145LS-1826-SM-5LUAZ

23.6

GTEX-YECK-1626-SM-5IFHQ

23.5

GTEX-R45C-1226-SM-48FEE

23.2

GTEX-Y111-1626-SM-57WCY

23.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	28.3

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 28.3

FF:10015-101C6

68,74,75 years, mixed

28.3