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SMARCD1
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TISSUE ATLAS PRIMARY DATA KIDNEY

GENE/PROTEIN

Antibody validation


Dictionary

Kidney

Tissue proteome

Kidney

KIDNEY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:27.7TPM
GTEx:17.2RPKM
FANTOM5:44.7Tags Per Million

KIDNEY - Annotated protein expression

Annotated protein
expression

Cells in glomeruli:High
Cells in tubules:High
 

Antibody staining

Antibody HPA004101

 

Cells in glomeruli

High  

Cells in tubules

High  
 
 
 

KIDNEY - HPA RNA-seq

Average TPM

27.7

overview Female, age 58
Sample 1
TPM: 24.7
Cell types%
Cells in tubules: 60
Cells in glomeruli: 20
Fibroblasts: 5
Other cell types: 15
overview Female, age 67
Sample 2
TPM: 20.8
Cell types%
Cells in tubules: 70
Cells in glomeruli: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 55
Sample 3
TPM: 25.4
Cell types%
Cells in tubules: 80
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 5
overview Male, age 46
Sample 4
TPM: 21.2
Cell types%
Cells in tubules: 60
Cells in glomeruli: 25
Fibroblasts: 5
Other cell types: 10
overview Female, age 57
Sample 5
TPM: 21.6
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 6
TPM: 36.0
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 5
Other cell types: 20
overview Male, age 73
Sample 7
TPM: 27.1
Cell types%
Cells in tubules: 60
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 20
overview Female, age 59
Sample 8
TPM: 41.8
Cell types%
Cells in tubules: 65
Cells in glomeruli: 10
Fibroblasts: 10
Other cell types: 15
overview Female, age 48
Sample 9
TPM: 30.8
Cell types%
Cells in tubules: 60
Cells in glomeruli: 5
Fibroblasts: 10
Other cell types: 25

KIDNEY - GTEx RNA-seq

Average RPKM

17.2

GTEx sample id

RPKM

 

Kidney - Cortex

Kidney - Cortex
RPKM: 17.2
Samples: 32

Max RPKM: 24.8
Min RPKM: 8.1
Std RPKM: 4.8
Median RPKM: 18
GTEX-RN64-1626-SM-48FD7 24.8
GTEX-ZVZP-0926-SM-5GIDB 24.5
GTEX-1399S-0526-SM-5IJG8 23.6
GTEX-QLQW-1626-SM-4R1K1 23.4
GTEX-ZLFU-0926-SM-5P9F8 23.0
GTEX-UPIC-1126-SM-4IHLO 22.6
GTEX-1497J-0826-SM-5NQAJ 21.8
GTEX-XPVG-0526-SM-4B65N 21.2
GTEX-13OVI-1126-SM-5KLZF 21.1
GTEX-12WSG-0826-SM-5EQ5A 20.9
GTEX-13112-2126-SM-5GCO4 20.5
GTEX-145MN-0326-SM-5QGQI 19.9
GTEX-147F4-2626-SM-5Q5CS 19.6
GTEX-ZYFG-1626-SM-5GZYY 19.2
GTEX-12696-0926-SM-5FQTV 19.1
GTEX-13O1R-2526-SM-5N9FW 18.0
GTEX-ZYT6-2226-SM-5GIC9 17.9
GTEX-P4QS-1126-SM-3NMD5 16.6
GTEX-11GS4-2326-SM-5A5KS 15.8
GTEX-13RTJ-2226-SM-5S2Q1 15.7
GTEX-QDVN-1626-SM-48TZC 15.4
GTEX-13OVL-1826-SM-5KLZR 14.5
GTEX-ZC5H-1726-SM-5HL7X 13.6
GTEX-13NYB-1726-SM-5N9G2 13.0
GTEX-Y5V6-2026-SM-5IFHO 12.2
GTEX-11TTK-1926-SM-5PNW8 12.1
GTEX-N7MS-1626-SM-3LK5F 11.9
GTEX-11OF3-1326-SM-5N9FJ 11.4
GTEX-T5JC-1526-SM-4DM68 11.3
GTEX-13OW6-1826-SM-5N9F9 10.3
GTEX-ZYFD-1526-SM-5NQ7T 8.8
GTEX-NPJ8-2226-SM-3TW8D 8.1
Show all

KIDNEY - FANTOM5 CAGE

Average Tags Per Million

44.7

FANTOM5 sample id

Sample description

Tags Per Million

Kidney
Tags Per Million: 44.7
FF:10017-101C8 60,62,63 years, female 44.7

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