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SMARCD1
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TISSUE ATLAS PRIMARY DATA OVARY

GENE/PROTEIN

Antibody validation


Dictionary

Ovary

Tissue proteome

Ovary

OVARY - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:32.2TPM
GTEx:18.7RPKM
FANTOM5:39.5Tags Per Million

OVARY - Annotated protein expression

Annotated protein
expression

Ovarian stroma cells:Medium
 

Antibody staining

Antibody HPA004101

 

Ovarian stroma cells

Medium  
 
 
 

OVARY - HPA RNA-seq

Average TPM

32.2

overview Female, age 64
Sample 1
TPM: 28.7
Cell types%
Stromal cells: 70
Smooth muscle cells: 15
Other cell types: 15
overview Female, age 52
Sample 2
TPM: 27.3
Cell types%
Stromal cells: 95
Other cell types: 5
overview Female, age 80
Sample 3
TPM: 40.8
Cell types%
Stromal cells: 70
Smooth muscle cells: 25
Other cell types: 5

OVARY - GTEx RNA-seq

Average RPKM

18.7

GTEx sample id

RPKM

 

Ovary

Ovary
RPKM: 18.7
Samples: 97

Max RPKM: 28.3
Min RPKM: 9.3
Std RPKM: 3.2
Median RPKM: 18.5
GTEX-POMQ-1426-SM-3P61D 28.3
GTEX-133LE-1226-SM-5IFGC 25.5
GTEX-146FH-2526-SM-5Q5BP 24.5
GTEX-T2IS-2026-SM-4DM6W 24.5
GTEX-13O3O-2726-SM-5KM35 24.4
GTEX-UJHI-1226-SM-4IHLR 24.2
GTEX-13VXT-1526-SM-5LU3J 23.8
GTEX-PWN1-2426-SM-48TDD 23.2
GTEX-U3ZN-1026-SM-4DXTC 22.8
GTEX-OHPL-2426-SM-48TDN 22.6
GTEX-P4QT-2426-SM-3NMCL 22.5
GTEX-YFC4-2726-SM-5IFJW 22.5
GTEX-145ME-1226-SM-5SIB6 22.3
GTEX-PX3G-2426-SM-48TZZ 22.0
GTEX-PWCY-1326-SM-48TCU 22.0
GTEX-Q734-0726-SM-48TZP 22.0
GTEX-XUW1-0126-SM-4BOOQ 21.7
GTEX-YJ8O-1026-SM-5CVM5 21.5
GTEX-ZZPU-2126-SM-5EGIU 21.4
GTEX-P78B-1926-SM-3P616 21.3
GTEX-XYKS-1726-SM-4E3IO 21.2
GTEX-XUZC-1026-SM-4BOPY 21.2
GTEX-1313W-2726-SM-5P9IX 21.0
GTEX-ZVT3-2626-SM-5GU5L 21.0
GTEX-S341-0726-SM-4AD5R 20.7
GTEX-ZYWO-1926-SM-5E456 20.7
GTEX-13FTX-0926-SM-5IFF7 20.7
GTEX-T5JW-0426-SM-4DM7M 20.5
GTEX-S7SF-1326-SM-4AD4P 20.4
GTEX-12WSK-1926-SM-5LZVK 20.4
GTEX-RU1J-0826-SM-46MUU 20.3
GTEX-13U4I-2126-SM-5LU55 20.2
GTEX-ZYY3-2726-SM-5EGH4 20.2
GTEX-XV7Q-1426-SM-4BRWA 19.9
GTEX-RU72-2226-SM-46MUE 19.9
GTEX-12ZZX-2026-SM-5LZV9 19.9
GTEX-ZAJG-2726-SM-5S2MU 19.7
GTEX-131YS-2226-SM-5P9G8 19.7
GTEX-W5WG-0926-SM-4RTX9 19.4
GTEX-12WSJ-1226-SM-5LU91 19.4
GTEX-11DXX-1426-SM-5GIDU 19.3
GTEX-OHPK-2426-SM-3MJGH 19.3
GTEX-12WSB-2226-SM-5GCOS 19.1
GTEX-TML8-0926-SM-4DXSJ 18.9
GTEX-11EM3-1726-SM-5N9D1 18.9
GTEX-S4P3-0926-SM-4AD54 18.8
GTEX-S32W-1226-SM-4AD67 18.7
GTEX-11GSP-0226-SM-5A5KV 18.5
GTEX-ZP4G-0626-SM-4WWF1 18.5
GTEX-13PL7-2326-SM-5L3FY 18.4
GTEX-14AS3-1326-SM-5RQJE 18.3
GTEX-13QIC-1526-SM-5IJFL 18.1
GTEX-ZVT2-0326-SM-5E44G 18.0
GTEX-ZPIC-1426-SM-4WWCP 17.6
GTEX-P4PP-2426-SM-3P61L 17.6
GTEX-12WSD-2726-SM-59HLR 17.6
GTEX-11VI4-1026-SM-5EQM1 17.6
GTEX-1269C-1826-SM-5N9E1 17.5
GTEX-11ZTS-1926-SM-5CVLA 17.5
GTEX-13PVR-1226-SM-5RQJ2 17.5
GTEX-TMMY-1726-SM-4DXTD 17.4
GTEX-T6MO-1126-SM-4DM5D 17.2
GTEX-QVJO-3126-SM-4R1KC 17.1
GTEX-11P81-1526-SM-5P9GS 17.0
GTEX-13X6H-1026-SM-5SIBE 17.0
GTEX-1399S-2126-SM-5J2MH 17.0
GTEX-11ZVC-1426-SM-5EGGA 16.9
GTEX-X4EO-2426-SM-4QASD 16.9
GTEX-X15G-1726-SM-4PQZN 16.8
GTEX-13QBU-1526-SM-5LU3W 16.7
GTEX-ZC5H-2026-SM-5CVN2 16.6
GTEX-132AR-1426-SM-5IFF1 16.6
GTEX-11ZTT-1826-SM-5CVLN 16.6
GTEX-12WSG-1426-SM-5FQUK 16.6
GTEX-13N11-0526-SM-5IJFI 16.5
GTEX-11I78-1926-SM-59878 16.4
GTEX-11XUK-1626-SM-5GU5O 16.3
GTEX-QCQG-1426-SM-48U22 16.3
GTEX-13W3W-1526-SM-5LU5I 16.3
GTEX-13D11-1126-SM-5KLYS 16.2
GTEX-XUJ4-1326-SM-4BOQ9 15.9
GTEX-XMD3-2326-SM-4AT5H 15.9
GTEX-Y3IK-2026-SM-4YCDG 15.7
GTEX-Y114-1726-SM-4TT7U 15.5
GTEX-X8HC-2726-SM-46MUA 15.3
GTEX-ZLWG-0926-SM-4WWC3 15.2
GTEX-ZYFG-1726-SM-5GZZB 15.1
GTEX-TSE9-2226-SM-4DXUR 15.0
GTEX-139D8-2426-SM-5KM3A 15.0
GTEX-RTLS-2326-SM-46MUH 15.0
GTEX-11EMC-1726-SM-5H11P 14.9
GTEX-13OVI-0726-SM-5L3DD 14.8
GTEX-PLZ4-2826-SM-3P617 13.8
GTEX-RWS6-1026-SM-47JXD 13.4
GTEX-13OVJ-2426-SM-5KM3I 11.8
GTEX-WWYW-2726-SM-4MVOP 9.4
GTEX-WI4N-2526-SM-4OOSE 9.3
Show all

OVARY - FANTOM5 CAGE

Average Tags Per Million

39.5

FANTOM5 sample id

Sample description

Tags Per Million

Ovary
Tags Per Million: 39.5
FF:10020-101D2 47,75,84 years, female 39.5

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.