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Expression

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SMARCD1
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:45.8TPM
GTEx:23.1RPKM
FANTOM5:76.1Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:High
Leydig cells:Medium
 

Antibody staining

Antibody HPA004101

 

Cells in seminiferous ducts

High  

Leydig cells

Medium  
 
 
 

TESTIS - HPA RNA-seq

Average TPM

45.8

overview Male, age 56
Sample 1
TPM: 51.1
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 42.5
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 50.6
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 39.8
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 42.4
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 46.6
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 42.9
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 50.0
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 45.2
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 46.5
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

23.1

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 23.1
Samples: 172

Max RPKM: 30.1
Min RPKM: 16.3
Std RPKM: 2.6
Median RPKM: 23.3
GTEX-QLQ7-1426-SM-4R1JX 30.1
GTEX-SNMC-1026-SM-4DM7K 29.2
GTEX-U3ZH-1526-SM-4DXV1 28.7
GTEX-XPVG-2226-SM-4B65U 28.1
GTEX-QLQW-1026-SM-447A9 28.0
GTEX-T8EM-0126-SM-4DM5R 27.7
GTEX-Y8E4-2226-SM-5LU94 27.7
GTEX-S3XE-1526-SM-4AD5A 27.4
GTEX-XBED-2026-SM-4AT5D 27.2
GTEX-O5YT-2126-SM-3MJGD 27.1
GTEX-UPJH-0126-SM-4IHLL 27.0
GTEX-WVLH-2626-SM-4MVNV 27.0
GTEX-U3ZM-1626-SM-4DXSK 26.9
GTEX-ZDTT-2026-SM-5K7TY 26.9
GTEX-144GM-0426-SM-5Q5C8 26.7
GTEX-147JS-0126-SM-5S2TW 26.7
GTEX-RM2N-1326-SM-48FCW 26.7
GTEX-S33H-0126-SM-4AD62 26.7
GTEX-ZDYS-1326-SM-5IJFF 26.6
GTEX-14A6H-2326-SM-5Q5B5 26.3
GTEX-NFK9-0126-SM-3LK5H 26.1
GTEX-13O21-1226-SM-5J2MK 26.0
GTEX-RN64-2326-SM-48FDW 26.0
GTEX-X5EB-2026-SM-4E3KA 26.0
GTEX-Y9LG-1726-SM-4VBQE 25.9
GTEX-WFON-2026-SM-4LVMW 25.8
GTEX-145MH-2326-SM-5O9AW 25.7
GTEX-TKQ1-0926-SM-4DXU2 25.7
GTEX-XQ3S-2726-SM-4BOP2 25.7
GTEX-YJ89-0626-SM-4TT3Z 25.7
GTEX-P4QS-2126-SM-3NMCF 25.6
GTEX-111CU-1726-SM-5EGHM 25.5
GTEX-111VG-1926-SM-5GIDO 25.4
GTEX-ZT9W-2226-SM-57WFU 25.4
GTEX-ZA64-1626-SM-5CVME 25.3
GTEX-ZUA1-2726-SM-59HLJ 25.3
GTEX-11LCK-2326-SM-5HL53 25.2
GTEX-11NSD-1026-SM-5N9BE 25.1
GTEX-13O1R-0726-SM-5IJEI 25.1
GTEX-13O61-2026-SM-5J2M6 25.1
GTEX-S7SE-0326-SM-4AT5Q 25.1
GTEX-WH7G-1926-SM-4LVMM 25.1
GTEX-XBEC-0126-SM-4GIDT 25.0
GTEX-YEC4-1526-SM-4W1YU 25.0
GTEX-R55C-1426-SM-48FED 24.9
GTEX-SUCS-1326-SM-4DM5T 24.9
GTEX-QV44-1726-SM-4R1KG 24.7
GTEX-U4B1-1526-SM-4DXSL 24.7
GTEX-YFCO-1726-SM-4W21S 24.7
GTEX-QV31-1126-SM-4R1K4 24.6
GTEX-WOFM-1126-SM-4OOSB 24.6
GTEX-X261-2326-SM-4PQYU 24.6
GTEX-13111-1526-SM-5EGJX 24.5
GTEX-QMRM-1526-SM-4R1K6 24.5
GTEX-111YS-2026-SM-5EGGL 24.4
GTEX-11EI6-2226-SM-5EGJM 24.4
GTEX-13NZA-2526-SM-5IJFX 24.4
GTEX-PLZ5-1526-SM-3P5ZX 24.4
GTEX-Q2AH-1526-SM-48TZG 24.4
GTEX-VJYA-1426-SM-4KL1Y 24.4
GTEX-14753-0626-SM-5Q5CY 24.3
GTEX-OOBK-2126-SM-3LK5T 24.3
GTEX-WZTO-0326-SM-4PQYZ 24.3
GTEX-ZYFC-0126-SM-5GIEH 24.2
GTEX-132QS-1226-SM-5P9GD 24.1
GTEX-ZV7C-2026-SM-5NQ8F 24.1
GTEX-ZZ64-1126-SM-5GZXY 24.1
GTEX-11ONC-2226-SM-5HL6D 24.0
GTEX-1212Z-0326-SM-5FQSJ 23.9
GTEX-R55D-0126-SM-48FEL 23.9
GTEX-XPT6-1626-SM-4B655 23.9
GTEX-12ZZY-0126-SM-5LZV2 23.8
GTEX-RUSQ-2126-SM-47JXK 23.8
GTEX-YB5E-1926-SM-5IFIG 23.8
GTEX-11TUW-2226-SM-5EQL9 23.7
GTEX-13NZB-2026-SM-5MR4M 23.7
GTEX-13VXU-0726-SM-5J2O7 23.7
GTEX-S95S-1126-SM-4B64E 23.6
GTEX-YEC3-1726-SM-5IFIK 23.6
GTEX-OOBJ-2126-SM-3NB1N 23.5
GTEX-XMK1-2026-SM-4B65K 23.5
GTEX-Q2AI-1226-SM-48U14 23.4
GTEX-R55E-0726-SM-48FCZ 23.4
GTEX-ZTX8-1126-SM-51MRM 23.4
GTEX-11EQ9-1926-SM-5PNVV 23.3
GTEX-13OW6-0126-SM-5IJGM 23.3
GTEX-145MO-0126-SM-5S2QU 23.3
GTEX-13112-0226-SM-5P9IV 23.1
GTEX-1339X-1926-SM-5PNVP 23.1
GTEX-RWSA-2426-SM-47JXR 23.1
GTEX-117XS-2026-SM-5GID1 23.0
GTEX-ZAB4-0126-SM-5CVMG 23.0
GTEX-Y5V6-1726-SM-4VDSZ 22.9
GTEX-11NV4-1726-SM-5N9FC 22.8
GTEX-139T6-1226-SM-5IFFC 22.8
GTEX-13FHP-2826-SM-5IJFW 22.8
GTEX-13OVH-0726-SM-5N9BU 22.7
GTEX-1399R-1626-SM-5P9GG 22.6
GTEX-N7MS-0126-SM-3TW8O 22.6
GTEX-U8XE-0126-SM-4E3I3 22.6
GTEX-X3Y1-2626-SM-4PQZI 22.6
GTEX-ZTSS-1526-SM-51MTC 22.5
GTEX-V1D1-2126-SM-4JBH4 22.4
GTEX-12696-0226-SM-5EGL3 22.3
GTEX-144GL-0726-SM-5LU4P 22.3
GTEX-ZVZP-2226-SM-57WBF 22.3
GTEX-11GS4-2026-SM-5N9CP 22.2
GTEX-145LT-0426-SM-5LUAP 22.2
GTEX-OIZH-2126-SM-3NB1P 22.2
GTEX-XGQ4-2026-SM-4AT6G 22.2
GTEX-12WSL-2326-SM-5DUXQ 22.1
GTEX-13NYB-2226-SM-5MR58 22.1
GTEX-YF7O-2026-SM-4W1YE 22.1
GTEX-ZPU1-2126-SM-57WED 22.1
GTEX-1399Q-2826-SM-5IJEZ 22.0
GTEX-13FTW-1326-SM-5LZZD 22.0
GTEX-REY6-0126-SM-48FDT 22.0
GTEX-WFG8-1926-SM-4LVM1 22.0
GTEX-ZT9X-1426-SM-5DUX1 22.0
GTEX-131XE-0426-SM-5IJF4 21.9
GTEX-SNOS-1126-SM-4DM67 21.9
GTEX-ZVTK-0126-SM-57WDG 21.9
GTEX-139TT-2226-SM-5LZWO 21.8
GTEX-147F4-0626-SM-5LUAK 21.8
GTEX-ZAB5-2426-SM-5CVMW 21.8
GTEX-13N2G-0126-SM-5N9DV 21.7
GTEX-OXRL-2126-SM-3NM98 21.7
GTEX-QEG4-0126-SM-48TZE 21.7
GTEX-11DXZ-2126-SM-59881 21.5
GTEX-WK11-0326-SM-4OOS6 21.5
GTEX-11EQ8-1426-SM-5EGJR 21.3
GTEX-12WSI-2126-SM-5GCMV 21.2
GTEX-XLM4-1526-SM-4AT6D 21.2
GTEX-13FLW-2126-SM-5N9FD 21.1
GTEX-14ABY-0626-SM-5Q5C9 21.1
GTEX-111FC-1926-SM-5GZYC 21.0
GTEX-11O72-0726-SM-5P9GO 20.9
GTEX-11P7K-1026-SM-5HL6Y 20.9
GTEX-139TS-1726-SM-5IJG5 20.9
GTEX-OHPM-2126-SM-3LK75 20.9
GTEX-XAJ8-1326-SM-47JYT 20.9
GTEX-13N1W-2626-SM-5IJEP 20.8
GTEX-TKQ2-1526-SM-4DXUN 20.8
GTEX-11NUK-2626-SM-5A5MB 20.7
GTEX-12C56-1426-SM-5FQSW 20.7
GTEX-S4Q7-1226-SM-4AD5I 20.7
GTEX-V955-1926-SM-4KL1L 20.7
GTEX-Y111-2426-SM-4TT23 20.6
GTEX-13OW5-2526-SM-5L3I1 20.5
GTEX-ZYT6-2726-SM-5GICP 20.5
GTEX-11P82-1526-SM-5BC5M 20.3
GTEX-144GN-1626-SM-5Q5BU 20.1
GTEX-P4QR-0226-SM-3NMCH 20.0
GTEX-13OVL-0426-SM-5IFG6 19.8
GTEX-OIZI-0126-SM-3NB13 19.7
GTEX-S7PM-0626-SM-4AD4Q 19.6
GTEX-11WQC-2326-SM-5EQKE 19.3
GTEX-117YW-1526-SM-5EGGP 19.2
GTEX-11ZUS-2726-SM-5FQUA 19.2
GTEX-11OF3-1826-SM-5987N 19.1
GTEX-PW2O-1426-SM-48TCD 19.1
GTEX-WHSB-2126-SM-4M1XF 19.1
GTEX-T6MN-2026-SM-4DM7L 18.9
GTEX-T5JC-0726-SM-4DM55 18.5
GTEX-11WQK-2826-SM-5EQKH 17.7
GTEX-12WSM-1326-SM-5GCP9 17.6
GTEX-11TT1-2226-SM-5GU6B 17.4
GTEX-QEG5-0126-SM-4R1JR 17.4
GTEX-ZQUD-2026-SM-51MSM 16.8
GTEX-U8T8-1126-SM-4DXUE 16.4
GTEX-12WSH-0326-SM-5GCNH 16.3
GTEX-Z93S-1726-SM-5HL8G 16.3
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

76.1

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 76.1
FF:10096-102C6 14-64 years, male 98.3
FF:10026-101D8 34,53,86 years, male 53.9

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