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Term
Gene name

Class

Subclass

Chromosome

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In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

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Score

Score

Antibodies

Column

 
 
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SPI1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

CANCER ATLAS

Gene description

Spi-1 proto-oncogene

Protein class

Predicted intracellular proteins, Predicted membrane proteins, Transcription factors

Protein evidence

Evidence at protein level
Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Lymphoma

STAINING SUMMARY

HPA044653
CAB004079

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Occasional colorectal, testicular and pancreatic cancers exhibited weak to moderate cytoplasmic and/or membranous staining. Moderate nuclear positivity was displayed in a rare case of non-Hodgkin's lymphoma. Remaining malignant tissues were negative.

Tissue

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Tissue

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Moderate to strong nuclear immunoreactivity was observed in lymphomas and gliomas. Most other tumor cells were negative.

GENE INFORMATION

Gene name

SPI1 (HGNC Symbol)

Synonyms

OF, PU.1, SFPI1, SPI-1, SPI-A

Description

Spi-1 proto-oncogene (HGNC Symbol)

Entrez gene summary

This gene encodes an ETS-domain transcription factor that activates gene expression during myeloid and B-lymphoid cell development. The nuclear protein binds to a purine-rich sequence known as the PU-box found near the promoters of target genes, and regulates their expression in coordination with other transcription factors and cofactors. The protein can also regulate alternative splicing of target genes. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Chromosome

11

Cytoband

p11.2

Chromosome location (bp)

47354860 - 47378576

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000066336 (version 83.38)

Entrez gene

6688

UniProt

P17947 (UniProt - Evidence at protein level)

neXtProt

NX_P17947

Antibodypedia

SPI1 antibodies

PROTEIN BROWSER

SPI1-001
SPI1-002
SPI1-003
SPI1-004

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SPI1-001
ENSP00000367799
ENST00000378538
P17947 [Direct mapping]
Transcription factor PU.1
Show all
Predicted intracellular proteins
Transcription factors
   Helix-turn-helix domains
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000790 [nuclear chromatin]
GO:0000980 [RNA polymerase II distal enhancer sequence-specific DNA binding]
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0001047 [core promoter binding]
GO:0001085 [RNA polymerase II transcription factor binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0003705 [transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0030154 [cell differentiation]
GO:0043565 [sequence-specific DNA binding]
GO:0043966 [histone H3 acetylation]
GO:0044027 [hypermethylation of CpG island]
GO:0045646 [regulation of erythrocyte differentiation]
GO:0045814 [negative regulation of gene expression, epigenetic]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0051525 [NFAT protein binding]
GO:0090241 [negative regulation of histone H4 acetylation]
GO:1902895 [positive regulation of pri-miRNA transcription from RNA polymerase II promoter]
Show all
270 aa
31.1 kDa
No 0
SPI1-002
ENSP00000438846
ENST00000533968
F5H3K6 [Direct mapping]
Transcription factor PU.1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0016021 [integral component of membrane]
GO:0030154 [cell differentiation]
Show all
245 aa
27.4 kDa
No 1
SPI1-003
ENSP00000443865
ENST00000533030
F5GZ94 [Direct mapping]
Transcription factor PU.1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0030154 [cell differentiation]
Show all
35 aa
3.7 kDa
No 0
SPI1-004
ENSP00000227163
ENST00000227163
P17947 [Direct mapping]
Transcription factor PU.1
Show all
Predicted intracellular proteins
Transcription factors
   Helix-turn-helix domains
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0000790 [nuclear chromatin]
GO:0000978 [RNA polymerase II core promoter proximal region sequence-specific DNA binding]
GO:0000979 [RNA polymerase II core promoter sequence-specific DNA binding]
GO:0000980 [RNA polymerase II distal enhancer sequence-specific DNA binding]
GO:0000981 [RNA polymerase II transcription factor activity, sequence-specific DNA binding]
GO:0000982 [transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding]
GO:0001047 [core promoter binding]
GO:0001077 [transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding]
GO:0001078 [transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding]
GO:0001085 [RNA polymerase II transcription factor binding]
GO:0001205 [transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding]
GO:0001944 [vasculature development]
GO:0002320 [lymphoid progenitor cell differentiation]
GO:0002573 [myeloid leukocyte differentiation]
GO:0003677 [DNA binding]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0003705 [transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0006355 [regulation of transcription, DNA-templated]
GO:0006357 [regulation of transcription from RNA polymerase II promoter]
GO:0006366 [transcription from RNA polymerase II promoter]
GO:0030098 [lymphocyte differentiation]
GO:0030154 [cell differentiation]
GO:0030218 [erythrocyte differentiation]
GO:0030225 [macrophage differentiation]
GO:0030851 [granulocyte differentiation]
GO:0035019 [somatic stem cell population maintenance]
GO:0043011 [myeloid dendritic cell differentiation]
GO:0043565 [sequence-specific DNA binding]
GO:0043966 [histone H3 acetylation]
GO:0044027 [hypermethylation of CpG island]
GO:0045347 [negative regulation of MHC class II biosynthetic process]
GO:0045646 [regulation of erythrocyte differentiation]
GO:0045814 [negative regulation of gene expression, epigenetic]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0045893 [positive regulation of transcription, DNA-templated]
GO:0045944 [positive regulation of transcription from RNA polymerase II promoter]
GO:0051525 [NFAT protein binding]
GO:0060033 [anatomical structure regression]
GO:0071361 [cellular response to ethanol]
GO:0090241 [negative regulation of histone H4 acetylation]
GO:1902262 [apoptotic process involved in patterning of blood vessels]
GO:1902895 [positive regulation of pri-miRNA transcription from RNA polymerase II promoter]
Show all
271 aa
31.2 kDa
No 0

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