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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.2TPM
GTEx:15.8RPKM
FANTOM5:26.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA001648

  

Antibody HPA005631

  

Adipocytes

 Low   Low  

Chondrocytes

 Not detected   Low  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 
 

Antibody staining

Antibody HPA001648

  

Antibody HPA005631

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Not detected   Medium  

Peripheral nerve

 Not detected  
      
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

0.2
N/A Female, age 80
Sample 1
TPM: 0.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 0.1
N/A Female, age 57
Sample 3
TPM: 0.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 0.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 0.0
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 14.0
Samples: 350

Max RPKM: 46.9
Min RPKM: 0
Std RPKM: 11.6
Median RPKM: 18.2
GTEX-13NZ9-0526-SM-5J1OX 46.9
GTEX-REY6-0326-SM-2TF5A 42.1
GTEX-XK95-0426-SM-4AT4R 41.4
GTEX-POYW-0726-SM-2XCEO 41.0
GTEX-13PDP-0226-SM-5K7W9 38.0
GTEX-14E6C-0226-SM-5S2N3 36.9
GTEX-ZE9C-2826-SM-5S2MO 36.3
GTEX-12WSA-0326-SM-5BC6I 32.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 18.6
Samples: 227

Max RPKM: 65.7
Min RPKM: 0
Std RPKM: 15.5
Median RPKM: 23.2
GTEX-ZTX8-0726-SM-59HL9 65.7
GTEX-WFJO-1026-SM-3GIKL 57.8
GTEX-ZQUD-0526-SM-57WG4 52.0
GTEX-Y9LG-1226-SM-4VBQA 49.7
GTEX-ZF28-1426-SM-5S2OG 48.6
GTEX-13PDP-1226-SM-5K7TW 47.7
GTEX-12KS4-1526-SM-5EQ6E 47.1
GTEX-13W46-1226-SM-5SIAS 43.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

26.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 26.9
FF:10010-101C1 65,65,76 years, mixed 26.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.