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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:284.4TPM
GTEx:122.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:High
Neuropil:High
 

Antibody staining

Antibody HPA051783

 

Antibody HPA051785

 

Antibody HPA053973

 

Antibody CAB004330

 

Endothelial cells

Not detected   Low   Not detected   Low  

Glial cells

Low   Not detected   Low   Not detected  

Neuronal cells

High   Medium   High   High  

Neuropil

High   Low   Medium   High  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

284.4

N/A Male, age 5
Sample 1
TPM: 298.2
overview Female, age 40
Sample 2
TPM: 167.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 387.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

122.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 111.0
Samples: 114

Max RPKM: 282.7
Min RPKM: 3.4
Std RPKM: 57.5
Median RPKM: 107.5
GTEX-11NV4-2126-SM-5N9DS 282.7
GTEX-Z93S-2926-SM-57WB9 231.1
GTEX-12126-1026-SM-5P9JJ 211.5
GTEX-11ZUS-2926-SM-5FQSL 207.1
GTEX-12ZZX-2926-SM-5GCOQ 196.5
GTEX-WWYW-3126-SM-3NB39 195.6
GTEX-T2IS-3026-SM-32QPM 193.5
GTEX-WHSE-3026-SM-3P5ZH 187.9
GTEX-13O3Q-2926-SM-5KM45 187.7
GTEX-13X6K-2926-SM-5Q5D5 185.4
GTEX-Y111-2726-SM-4TT3N 184.7
GTEX-ZYFD-3026-SM-5E44C 181.5
GTEX-QVJO-1426-SM-2S1QY 178.8
GTEX-PVOW-2526-SM-2XCF7 177.4
GTEX-11PRG-2926-SM-5987A 177.0
GTEX-WL46-2926-SM-3LK82 175.0
GTEX-13NYC-2826-SM-5K7WR 174.5
GTEX-145MH-3026-SM-5Q5DZ 172.7
GTEX-12WSC-3026-SM-5GCNF 172.5
GTEX-WZTO-2926-SM-3NM9I 170.8
GTEX-ZUA1-3026-SM-59HJC 170.7
GTEX-144GL-3026-SM-5Q5CW 169.6
GTEX-WVLH-3026-SM-3MJG9 169.2
GTEX-13FXS-3126-SM-5J2NN 168.2
GTEX-T5JC-2426-SM-3NMDB 168.0
GTEX-14A5I-2926-SM-5Q5CQ 166.5
GTEX-R55F-1326-SM-5S2V4 166.4
GTEX-131YS-3126-SM-5KLYT 163.0
GTEX-1128S-2726-SM-5H12C 162.7
GTEX-1313W-3126-SM-5LZUI 160.4
GTEX-14BMV-3026-SM-5S2PQ 160.2
GTEX-13JUV-2926-SM-5LZX7 158.5
GTEX-X4XX-3026-SM-3NMB2 156.7
GTEX-YFC4-3126-SM-5PNV6 147.1
GTEX-Q2AG-2926-SM-2HMJ3 144.4
GTEX-NPJ8-1526-SM-2D7VU 142.4
GTEX-T6MN-2626-SM-32PMQ 141.8
GTEX-11NUK-2926-SM-5A5MD 139.8
GTEX-YJ89-3026-SM-5IFJI 139.0
GTEX-14ASI-3026-SM-5S2PN 138.8
GTEX-ZAK1-3026-SM-5S2MJ 138.8
GTEX-117XS-3026-SM-5N9CA 137.1
GTEX-RU72-3026-SM-5SI7Y 137.1
GTEX-13OW6-3026-SM-5J2MI 135.6
GTEX-XOTO-3026-SM-4B65M 135.5
GTEX-13VXU-2926-SM-5LU5C 129.2
GTEX-RNOR-2326-SM-2TF4I 127.3
GTEX-13SLX-3126-SM-5S2Q5 126.9
GTEX-TSE9-3026-SM-3DB76 125.9
GTEX-11DXY-3226-SM-5GIDE 124.5
GTEX-11EI6-3026-SM-5GZZO 121.7
GTEX-11GSO-2926-SM-5HL73 121.3
GTEX-OXRN-2426-SM-2I5EQ 120.7
GTEX-13OVH-3026-SM-5MR4N 115.3
GTEX-X585-3026-SM-46MWF 110.6
GTEX-131XW-3126-SM-5LZUC 108.7
GTEX-132Q8-3026-SM-5PNVG 107.9
GTEX-13FHP-3026-SM-5IJBS 107.2
GTEX-13NYS-3126-SM-5KLYV 106.5
GTEX-13X6J-3026-SM-5Q5CU 104.8
GTEX-11DXW-1126-SM-5H12Q 102.7
GTEX-145LS-3126-SM-5Q5BY 101.9
GTEX-Y8DK-0826-SM-4TT3T 99.0
GTEX-13FLW-1426-SM-5K7YE 98.0
GTEX-13PL6-3126-SM-5LUAR 97.0
GTEX-12ZZY-3026-SM-5GCOU 95.5
GTEX-145MF-2726-SM-5O995 94.1
GTEX-12ZZW-2926-SM-5LZUP 92.6
GTEX-QMR6-1426-SM-32PLA 92.0
GTEX-145MG-3026-SM-5RQJA 88.6
GTEX-111FC-3126-SM-5GZZ2 88.0
GTEX-NPJ7-2726-SM-2I3FT 87.4
GTEX-13QIC-2926-SM-5J2NF 87.0
GTEX-147GR-3026-SM-5S2ML 86.3
GTEX-11EMC-3226-SM-5EGKW 85.6
GTEX-13FHO-3026-SM-5J1O9 83.4
GTEX-QDT8-2926-SM-32PKC 82.5
GTEX-13O3O-3126-SM-5KM3H 82.0
GTEX-ZVT3-3026-SM-5E43N 79.3
GTEX-1399T-3026-SM-5KLZC 78.8
GTEX-1192X-3126-SM-5N9BY 77.0
GTEX-12WSH-3026-SM-5CVNI 72.9
GTEX-XLM4-3026-SM-4AT6L 71.4
GTEX-11OC5-0726-SM-5P9JK 70.6
GTEX-ZE7O-3126-SM-5HL5X 70.1
GTEX-11ONC-2926-SM-5P9JM 67.2
GTEX-UTHO-3026-SM-3GAFB 67.2
GTEX-12ZZZ-3026-SM-5BC67 59.0
GTEX-12WSD-3126-SM-5HL7P 58.8
GTEX-13NYB-3026-SM-5IJD7 57.0
GTEX-11GS4-3126-SM-5A5LH 53.6
GTEX-ZAJG-3126-SM-5HL9J 52.4
GTEX-13OW8-2826-SM-5L3GC 52.0
GTEX-13JVG-3126-SM-5L3FH 43.5
GTEX-13S7M-3126-SM-5RQJQ 42.2
GTEX-139T8-1026-SM-5J2MC 42.1
GTEX-ZZPT-3026-SM-5GZXH 39.6
GTEX-QVUS-2826-SM-3GADB 38.2
GTEX-1117F-3226-SM-5N9CT 35.7
GTEX-13G51-3026-SM-5IJB8 35.4
GTEX-11TTK-2926-SM-5PNYP 32.8
GTEX-144FL-3026-SM-5O99C 32.4
GTEX-N7MT-1126-SM-5SI7V 30.3
GTEX-13OW7-3026-SM-5L3GY 30.2
GTEX-13IVO-2926-SM-5L3CZ 29.4
GTEX-11WQK-3026-SM-5EQL6 27.2
GTEX-11GSP-3226-SM-5986O 26.5
GTEX-11O72-2926-SM-5BC4V 25.0
GTEX-PWO3-0926-SM-2I5EY 22.5
GTEX-13PVQ-3026-SM-5SI93 21.9
GTEX-12WSA-2926-SM-5EQ4D 20.6
GTEX-13OVJ-2826-SM-5L3GW 15.4
GTEX-1445S-3026-SM-5O9BR 11.2
GTEX-11OF3-2926-SM-5HL78 3.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 133.7
Samples: 108

Max RPKM: 368.7
Min RPKM: 6.1
Std RPKM: 76.9
Median RPKM: 128.8
GTEX-Q2AG-0011-R10A-SM-2HMLA 368.7
GTEX-12126-0011-R10b-SM-5BC6T 304.1
GTEX-12WSE-0011-R10b-SM-5P9JV 286.5
GTEX-WL46-0011-R10A-SM-3MJFQ 283.3
GTEX-131XH-0011-R10a-SM-5EGLJ 274.1
GTEX-12WSM-0011-R10a-SM-5DUWV 268.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 248.6
GTEX-N7MS-0011-R10A-SM-2HMJK 243.9
GTEX-YJ89-0011-R10a-SM-4SOK9 240.1
GTEX-T5JC-0011-R10A-SM-32PM2 232.0
GTEX-13OVL-0011-R10a-SM-5L3GS 228.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 228.1
GTEX-NL3H-0011-R10A-SM-2I3E9 227.4
GTEX-WZTO-0011-R10B-SM-4E3KB 224.3
GTEX-13OW6-0011-R10a-SM-5L3HE 223.6
GTEX-13JUV-0011-R10b-SM-5LZXR 213.6
GTEX-1313W-0011-R10b-SM-5DUXA 212.6
GTEX-X585-0011-R10A-SM-46MUY 212.2
GTEX-ZF28-0011-R10a-SM-4WWEH 212.2
GTEX-X4XX-0011-R10B-SM-46MWO 205.0
GTEX-S7SE-0011-R10A-SM-2XCDF 201.6
GTEX-WVLH-0011-R10A-SM-3MJFM 199.0
GTEX-Z93S-0011-R10a-SM-4RGNM 194.8
GTEX-13O3Q-0011-R10b-SM-5KM39 194.7
GTEX-131YS-0011-R10b-SM-5EQ5N 192.8
GTEX-11ZUS-0011-R10b-SM-5BC79 191.7
GTEX-145MH-0011-R10b-SM-5PNUK 190.7
GTEX-NL4W-0011-R10A-SM-2I3DY 190.7
GTEX-145MG-0011-R10a-SM-5PNWG 189.7
GTEX-TSE9-0011-R10A-SM-3DB7O 185.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 180.7
GTEX-ZXG5-0011-R10a-SM-57WDD 178.2
GTEX-13G51-0011-R10b-SM-5LZYF 177.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 176.5
GTEX-T6MN-0011-R10A-SM-32QP7 173.7
GTEX-145LS-0011-R10a-SM-5PNUQ 173.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 172.3
GTEX-13X6J-0011-R10b-SM-5PNWA 171.7
GTEX-YFC4-0011-R10a-SM-4SOK5 171.3
GTEX-13FHO-0011-R10b-SM-5J2MM 163.7
GTEX-13FXS-0011-R10a-SM-5J2MA 160.5
GTEX-13S7M-0011-R10b-SM-5PNZB 158.8
GTEX-11H98-0011-R10b-SM-5NQ98 154.6
GTEX-13QIC-0011-R10a-SM-5O9C7 149.0
GTEX-139TS-0011-R10a-SM-5K7TU 145.2
GTEX-13FLW-0011-R10b-SM-5LZZF 144.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 143.4
GTEX-13X6K-0011-R10a-SM-5P9JR 143.3
GTEX-12WSF-0011-R10a-SM-5LZVH 141.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 138.2
GTEX-147GR-0011-R10b-SM-5S2UM 134.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 133.8
GTEX-14BIN-0011-R10a-SM-5S2UA 132.6
GTEX-XLM4-0011-R10A-SM-4AT5P 129.2
GTEX-13OW7-0011-R10a-SM-5L3H3 128.4
GTEX-QDT8-0011-R10A-SM-32PKG 127.7
GTEX-13OW8-0011-R10a-SM-5L3H6 124.4
GTEX-13X6I-0011-R10a-SM-5PNWI 123.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 120.8
GTEX-12WSC-0011-R10a-SM-5GU57 119.3
GTEX-11WQC-0011-R10a-SM-57WCT 117.9
GTEX-ZVT3-0011-R10b-SM-57WB6 116.7
GTEX-147F4-0011-R10b-SM-5S2WC 114.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 114.8
GTEX-QMR6-0011-R10A-SM-32PKO 112.8
GTEX-13N1W-0011-R10b-SM-5MR4H 110.9
GTEX-OXRN-0011-R10A-SM-2I5GC 110.9
GTEX-14BIL-0011-R10a-SM-5SI75 109.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 108.8
GTEX-WWYW-0011-R10A-SM-3NB35 108.0
GTEX-13CZV-0011-R10b-SM-5LZYD 107.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 107.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 106.0
GTEX-12WSH-0011-R10a-SM-5LZUS 104.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 96.5
GTEX-P44H-0011-R10A-SM-2XCEK 85.8
GTEX-N7MT-0011-R10A-SM-2I3E1 85.0
GTEX-13SLX-0011-R10a-SM-5P9HV 80.6
GTEX-ZUA1-0011-R10a-SM-51MT6 76.4
GTEX-13NYB-0011-R10a-SM-5KM43 73.5
GTEX-13NYS-0011-R10a-SM-5MR4S 71.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 68.6
GTEX-13SLW-0011-R10a-SM-5S2UI 67.5
GTEX-13QJC-0011-R10a-SM-5SI63 61.7
GTEX-13NZA-0011-R10b-SM-5KM54 59.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 56.7
GTEX-X4EP-0011-R10B-SM-4QASJ 55.1
GTEX-145LU-0011-R10a-SM-5PNWJ 52.4
GTEX-11WQK-0011-R10a-SM-5BC6R 51.4
GTEX-1477Z-0011-R10b-SM-5S2RF 51.4
GTEX-13O3O-0011-R10a-SM-5LUA9 49.6
GTEX-QVUS-0011-R10A-SM-3GIK3 48.0
GTEX-14753-0011-R10b-SM-5S2WE 46.5
GTEX-11GSP-0011-R10a-SM-5NQ7J 34.7
GTEX-13N2G-0011-R10a-SM-5MR34 26.5
GTEX-XMD1-0011-R10A-SM-4AT4A 25.2
GTEX-ZE7O-0011-R10a-SM-57WAZ 24.4
GTEX-13IVO-0011-R10a-SM-5LZY3 22.9
GTEX-OXRO-0011-R10A-SM-2I5EH 22.0
GTEX-ZV68-0011-R10a-SM-51MT7 21.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 20.2
GTEX-12WSA-0011-R10b-SM-5P9ET 15.8
GTEX-13JVG-0011-R10b-SM-5KM2P 15.8
GTEX-X261-0011-R10B-SM-4E3JT 15.8
GTEX-1445S-0011-R10a-SM-5PNWB 15.7
GTEX-12WSD-0011-R10b-SM-5GU79 15.1
GTEX-RVPU-0011-R10A-SM-2XCAH 13.1
GTEX-131XW-0011-R10a-SM-5DUVA 6.1
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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