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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:33.9RPKM
FANTOM5:108.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA008476

 

Glial cells

Low  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

33.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 33.9
Samples: 117

Max RPKM: 125.5
Min RPKM: 7.5
Std RPKM: 17.1
Median RPKM: 28.2
GTEX-X4XX-0011-R5A-SM-46MWN 125.5
GTEX-Z93S-0011-R5b-SM-4RGNI 89.5
GTEX-13FHP-0011-R5b-SM-5LZY2 75.8
GTEX-12WSA-0011-R5b-SM-5GU5I 73.4
GTEX-11UD1-0011-R5b-SM-5P9FP 72.3
GTEX-R55E-0011-R5A-SM-2TC5N 70.3
GTEX-YJ89-0011-R5a-SM-4V6GM 68.0
GTEX-N7MS-0011-R5a-SM-2HMK8 61.2
GTEX-QMR6-0011-R5A-SM-32PKT 61.2
GTEX-YFC4-0011-R5a-SM-4RGLR 58.4
GTEX-13CF2-0011-R5a-SM-5LZWS 57.9
GTEX-PVOW-0011-R5A-SM-32PL7 54.7
GTEX-QVJO-0011-R5A-SM-2S1QM 51.7
GTEX-NL3H-0011-R5a-SM-2I3GB 51.5
GTEX-11NV4-0011-R5a-SM-5NQ88 51.3
GTEX-144GL-0011-R5b-SM-5PNUJ 49.5
GTEX-13O3O-0011-R5b-SM-5KM44 49.3
GTEX-WL46-0011-R5A-SM-3LK6V 47.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 47.0
GTEX-12WSD-0011-R5b-SM-5CVNG 45.7
GTEX-NPJ7-0011-R5a-SM-33HBK 45.4
GTEX-ZXG5-0011-R5b-SM-57WBN 45.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 44.8
GTEX-NL4W-0011-R5a-SM-2I3GD 44.6
GTEX-X585-0011-R5A-SM-46MVI 43.6
GTEX-WWYW-0011-R5A-SM-3NB3E 42.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 42.2
GTEX-13OW5-0011-R5b-SM-5L3FR 40.7
GTEX-S7PM-0011-R5A-SM-3NM8G 40.5
GTEX-13OW7-0011-R5b-SM-5O9DM 40.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 39.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 38.0
GTEX-13NYB-0011-R5a-SM-5MR45 37.9
GTEX-1445S-0011-R5a-SM-5PNUS 37.8
GTEX-13JUV-0011-R5a-SM-5LZY5 37.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 37.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 37.2
GTEX-144GO-0011-R5a-SM-5PNUR 36.7
GTEX-XOTO-0011-R5A-SM-4B657 36.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 35.5
GTEX-13FXS-0011-R5b-SM-5LZYE 35.0
GTEX-13FLW-0011-R5a-SM-5LZX6 34.8
GTEX-13X6I-0011-R5a-SM-5PNWW 34.7
GTEX-11WQC-0011-R5a-SM-5BC74 34.6
GTEX-WZTO-0011-R5B-SM-3NMC5 34.3
GTEX-12WSH-0011-R5b-SM-5P9F3 34.0
GTEX-145MG-0011-R5b-SM-5S2VU 33.9
GTEX-RVPV-0011-R5A-SM-2TF69 33.9
GTEX-OHPN-0011-R5A-SM-2I5FF 33.2
GTEX-13JVG-0011-R5a-SM-5MR4O 32.1
GTEX-T5JC-0011-R5A-SM-32PLK 32.0
GTEX-13SLX-0011-R5a-SM-5O9BV 31.9
GTEX-13NZA-0011-R5b-SM-5KM4K 31.3
GTEX-145MH-0011-R5a-SM-5P9JT 31.2
GTEX-13112-0011-R5b-SM-5DUV8 29.8
GTEX-RU72-0011-R5A-SM-2TF6U 29.2
GTEX-145LS-0011-R5a-SM-5SI65 28.7
GTEX-13NYS-0011-R5a-SM-5MR4D 28.3
GTEX-13OW6-0011-R5a-SM-5O9BK 28.2
GTEX-XMD1-0011-R5A-SM-4AT47 28.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 28.0
GTEX-12WSB-0011-R5b-SM-5GU67 27.9
GTEX-14ABY-0011-R5b-SM-5SI7B 27.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 27.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 27.2
GTEX-X261-0011-R5A-SM-3NMB4 27.2
GTEX-13OVH-0011-R5b-SM-5KM4L 26.7
GTEX-N7MT-0011-R5a-SM-2I3G6 26.7
GTEX-11H98-0011-R5b-SM-57WCF 26.3
GTEX-13OVL-0011-R5b-SM-5L3FU 26.3
GTEX-14BIN-0011-R5b-SM-5SI78 26.3
GTEX-ZE7O-0011-R5a-SM-57WBO 26.1
GTEX-WVLH-0011-R5A-SM-3MJFW 26.0
GTEX-UTHO-0011-R5A-SM-3GIJD 25.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 25.6
GTEX-12WSF-0011-R5a-SM-5HL8K 25.5
GTEX-13S7M-0011-R5b-SM-5P9HS 25.5
GTEX-13FLV-0011-R5a-SM-5LZWT 25.3
GTEX-ZVT3-0011-R5a-SM-51MSI 25.3
GTEX-12ZZX-0011-R5a-SM-5HL89 24.3
GTEX-139TS-0011-R5b-SM-5J2MZ 24.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 24.3
GTEX-1477Z-0011-R5b-SM-5PNUO 24.2
GTEX-S7SE-0011-R5A-SM-2XCDA 24.2
GTEX-11GSP-0011-R5a-SM-57WBE 24.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 24.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 24.0
GTEX-139TT-0011-R5b-SM-5K7W8 23.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 23.2
GTEX-P44H-0011-R5A-SM-2XCEX 23.2
GTEX-13VXU-0011-R5a-SM-5O9D7 23.1
GTEX-OXRN-0011-R5A-SM-2I5EF 22.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 22.5
GTEX-1313W-0011-R5b-SM-5L3EP 22.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 22.1
GTEX-ZV68-0011-R5a-SM-4YCDW 22.1
GTEX-14BIM-0011-R5b-SM-5S2RM 21.7
GTEX-13X6J-0011-R5b-SM-5PNWT 21.1
GTEX-131YS-0011-R5b-SM-5K7YB 21.0
GTEX-13CIG-0011-R5b-SM-5L3F2 20.8
GTEX-T6MN-0011-R5A-SM-32QPD 20.8
GTEX-RVPU-0011-R5A-SM-2XCAD 20.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 19.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 18.4
GTEX-132Q8-0011-R5a-SM-5IJDM 18.4
GTEX-12WSC-0011-R5b-SM-5CVNS 18.1
GTEX-11OF3-0011-R5a-SM-57WB4 17.8
GTEX-ZUA1-0011-R5b-SM-51MTG 17.6
GTEX-139T8-0011-R5b-SM-5J1MO 16.8
GTEX-13X6K-0011-R5b-SM-5PNUE 15.3
GTEX-13CZV-0011-R5a-SM-5K7XA 14.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 14.8
GTEX-1399T-0011-R5b-SM-5IJDK 14.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 13.5
GTEX-13G51-0011-R5a-SM-5L3EB 13.1
GTEX-TSE9-0011-R5A-SM-3DB7J 8.9
GTEX-T2IS-0011-R5A-SM-32QP4 7.5
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

108.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 108.6
FF:10164-103B2 76 years, female 139.3
FF:10379-105H1 89 years, female 77.9

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