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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:252.8TPM
GTEx:88.8RPKM
FANTOM5:960.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA014757

 

Glandular cells

High  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

252.8

overview Male, age 65
Sample 1
TPM: 308.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 277.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 164.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 260.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

88.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 88.8
Samples: 88

Max RPKM: 251.7
Min RPKM: 12.6
Std RPKM: 50.3
Median RPKM: 73.7
GTEX-ZXES-1526-SM-5NQ95 251.7
GTEX-13PL7-2626-SM-5IFH4 220.1
GTEX-ZTSS-0926-SM-59865 215.2
GTEX-145LT-1026-SM-5LU9O 196.2
GTEX-ZVZP-1826-SM-5GZXB 188.7
GTEX-14DAR-1426-SM-5RQIR 184.7
GTEX-YB5E-1526-SM-5IFIE 174.3
GTEX-YF7O-1826-SM-5IFIU 165.3
GTEX-Y9LG-1626-SM-5IFHM 164.7
GTEX-ZTX8-0526-SM-59HLD 164.3
GTEX-ZZ64-0526-SM-5GZXM 161.3
GTEX-13D11-0726-SM-5LZZB 159.6
GTEX-YEC4-1726-SM-4W21E 147.5
GTEX-ZPCL-1726-SM-57WEO 146.8
GTEX-ZLV1-1126-SM-4WWBW 146.2
GTEX-1122O-1326-SM-5H11F 140.1
GTEX-ZLFU-1526-SM-4WWBT 135.2
GTEX-11DXX-1626-SM-5H11H 132.1
GTEX-XGQ4-1326-SM-4GIDU 125.5
GTEX-131XF-1326-SM-5GCMQ 123.8
GTEX-11EQ9-1326-SM-5985X 121.1
GTEX-11P7K-1626-SM-5GU63 116.3
GTEX-13O61-1326-SM-5KM31 113.7
GTEX-11DXZ-1326-SM-5H11X 110.6
GTEX-XUZC-1426-SM-4BRV3 108.6
GTEX-XBED-1426-SM-4AT4G 107.1
GTEX-13113-1226-SM-5EGHT 103.5
GTEX-11I78-1126-SM-5A5K5 103.2
GTEX-X5EB-1626-SM-4E3IV 102.0
GTEX-13OVI-1926-SM-5IJCG 101.9
GTEX-111YS-1426-SM-5GID8 96.9
GTEX-1399S-2026-SM-5KM4B 95.6
GTEX-139YR-2226-SM-5IFFW 88.0
GTEX-148VJ-2226-SM-5NQ9M 86.3
GTEX-ZA64-1226-SM-5HL7B 84.7
GTEX-ZTPG-2626-SM-57WFX 84.6
GTEX-ZYWO-1526-SM-5SIAL 83.0
GTEX-ZYFG-2026-SM-5E43Y 82.3
GTEX-12BJ1-1926-SM-5HL9Z 81.9
GTEX-133LE-1426-SM-5IFH1 79.0
GTEX-WFG7-1726-SM-4LVME 75.9
GTEX-13FTW-2026-SM-5IJE2 75.4
GTEX-13O21-1026-SM-5IJDU 75.0
GTEX-11P82-0826-SM-5P9GU 74.2
GTEX-ZVP2-1726-SM-5GU5P 73.2
GTEX-1399R-2026-SM-5K7WN 71.4
GTEX-1399U-2126-SM-5IFEZ 70.2
GTEX-Y114-1426-SM-4TT6W 68.8
GTEX-WFJO-0926-SM-4LVM2 68.8
GTEX-XXEK-1026-SM-4BRUW 67.8
GTEX-11NSD-1726-SM-5N9C3 66.9
GTEX-ZF2S-1726-SM-57WFT 65.8
GTEX-139T6-1026-SM-5IJGC 65.1
GTEX-ZPIC-2326-SM-57WDW 63.9
GTEX-ZEX8-1826-SM-57WBH 61.5
GTEX-Y3IK-1726-SM-4YCCR 60.8
GTEX-145ME-0926-SM-5O9AR 60.0
GTEX-ZVT2-2126-SM-5NQ93 59.9
GTEX-WH7G-1626-SM-4LVMY 59.3
GTEX-ZQUD-0926-SM-57WE3 59.1
GTEX-12WSK-1526-SM-5CVNO 58.8
GTEX-WQUQ-2426-SM-4MVNW 54.0
GTEX-13RTK-0826-SM-5Q5C6 53.7
GTEX-117YX-0326-SM-5GICL 53.5
GTEX-1192X-2526-SM-59868 53.2
GTEX-XAJ8-0526-SM-47JYK 51.3
GTEX-111CU-1326-SM-5NQ8L 50.1
GTEX-14E6E-1626-SM-5RQI7 49.0
GTEX-11XUK-1426-SM-5EQMG 49.0
GTEX-VJYA-0926-SM-4KL1N 46.6
GTEX-13QBU-1926-SM-5IJEW 44.7
GTEX-131XG-1726-SM-5LZUR 43.1
GTEX-13FH7-1226-SM-5IJFK 42.8
GTEX-ZC5H-2326-SM-4WAYT 42.6
GTEX-Y5LM-1626-SM-4VDTB 42.1
GTEX-XMK1-1826-SM-4B66F 41.4
GTEX-WFG8-1626-SM-4LVMB 40.9
GTEX-ZQG8-2526-SM-57WEQ 39.6
GTEX-13111-1426-SM-5DUW3 39.4
GTEX-ZP4G-1626-SM-57WGD 38.3
GTEX-VUSG-1726-SM-4KKZL 37.3
GTEX-11VI4-1626-SM-5EQKO 35.5
GTEX-WEY5-1526-SM-4LMJF 34.4
GTEX-WRHK-1026-SM-4MVOD 34.0
GTEX-X15G-1426-SM-4PQZK 32.6
GTEX-Z9EW-0926-SM-5CVMM 31.8
GTEX-13CF3-1226-SM-5LZXN 28.4
GTEX-UPK5-2026-SM-4JBIM 12.6
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

960.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 960.7
FF:10024-101D6 15,40,85 years, mixed 960.7

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.