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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.4TPM
GTEx:4.4RPKM
FANTOM5:2.5Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:High
 
 

Antibody staining

Antibody HPA006288

 

Antibody HPA007010

 

Antibody CAB000083

 

Adipocytes

Not detected   Low  

Glandular cells

Not detected   High   Not detected  

Myoepithelial cells

High   Low   High  
        
     
     
     

BREAST - HPA RNA-seq

Average TPM

22.4

overview Female, age 52
Sample 1
TPM: 18.3
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 27.4
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 21.5
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 22.3
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

4.4

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 4.4
Samples: 214

Max RPKM: 33.7
Min RPKM: 0
Std RPKM: 5.9
Median RPKM: 2.4
GTEX-12ZZX-1126-SM-5EGKB 33.7
GTEX-R3RS-0626-SM-48FE1 32.2
GTEX-13PL6-2926-SM-5L3I2 29.4
GTEX-RU72-0626-SM-46MUI 25.6
GTEX-ZC5H-2626-SM-5J2MG 24.1
GTEX-WYVS-1726-SM-3NMAY 23.1
GTEX-Y3IK-2326-SM-4WWDT 20.5
GTEX-13FTY-2226-SM-5J1ND 16.8
GTEX-13113-1726-SM-5GCOO 15.4
GTEX-13QIC-2326-SM-5LU5N 15.1
GTEX-QDT8-0626-SM-48TYW 15.1
GTEX-11P81-1926-SM-5BC53 14.5
GTEX-131YS-0626-SM-5EGKL 14.1
GTEX-14AS3-1626-SM-5S2OY 13.9
GTEX-VJWN-0726-SM-3GIJ8 13.8
GTEX-ZF2S-2026-SM-5E461 13.7
GTEX-Y5V5-2126-SM-4WWFO 13.6
GTEX-YFC4-1426-SM-5IFJG 13.3
GTEX-WYBS-0926-SM-3NM94 13.1
GTEX-XOT4-0726-SM-4GIAW 12.1
GTEX-UJHI-1426-SM-3DB9C 11.5
GTEX-1269C-2426-SM-5FQSN 10.9
GTEX-11EMC-2026-SM-5A5JV 10.5
GTEX-X15G-1626-SM-3NMB3 10.2
GTEX-RWS6-1926-SM-47JXY 9.9
GTEX-ZVT2-1826-SM-5NQ8W 9.6
GTEX-Q2AG-0326-SM-48U1O 9.5
GTEX-WXYG-2226-SM-4E3IM 9.4
GTEX-131XW-0726-SM-5EGK3 9.3
GTEX-TMMY-0726-SM-33HBE 9.3
GTEX-W5X1-2326-SM-3GIL6 9.3
GTEX-11PRG-0826-SM-5EQ6A 9.2
GTEX-133LE-1726-SM-5K7VQ 9.0
GTEX-T2IS-1526-SM-32QPR 9.0
GTEX-ZLV1-1426-SM-4WWES 9.0
GTEX-ZZPU-0626-SM-5E43T 9.0
GTEX-U3ZH-1426-SM-4DXSR 8.9
GTEX-11EM3-1326-SM-5N9C6 8.7
GTEX-X4EP-2926-SM-3P5YQ 8.7
GTEX-TML8-1226-SM-32QON 8.5
GTEX-ZF29-1926-SM-5S2P1 8.4
GTEX-SE5C-2126-SM-4BRUJ 8.2
GTEX-S4P3-1326-SM-4AD6V 8.1
GTEX-T6MO-0326-SM-32QOK 8.0
GTEX-XUW1-2326-SM-4BOO5 8.0
GTEX-ZF3C-2326-SM-5S2MZ 7.7
GTEX-13NZ8-0126-SM-5IJCT 7.4
GTEX-Y5LM-1726-SM-4VDSX 7.4
GTEX-ZAJG-0626-SM-5HL8X 7.4
GTEX-ZXES-0826-SM-5E43C 7.4
GTEX-13OW5-2226-SM-5L3HC 7.3
GTEX-13O3O-0826-SM-5K7WE 7.0
GTEX-13W3W-1226-SM-5LU4H 7.0
GTEX-XUZC-1626-SM-4BRVP 6.9
GTEX-13NZ9-1026-SM-5MR5K 6.8
GTEX-WI4N-1426-SM-3LK7H 6.8
GTEX-WRHU-0326-SM-3MJFY 6.6
GTEX-XUJ4-1926-SM-4BOOV 6.5
GTEX-13NZB-2126-SM-5MR4Y 6.3
GTEX-147F4-2826-SM-5NQBN 6.3
GTEX-U3ZN-1926-SM-4DXSG 6.3
GTEX-ZVZQ-0826-SM-51MRF 6.0
GTEX-139T8-0826-SM-5L3DE 5.9
GTEX-13D11-1026-SM-5IJFB 5.7
GTEX-13FHO-0826-SM-5L3E8 5.7
GTEX-13N11-1726-SM-5J1OJ 5.7
GTEX-S341-1526-SM-4AD6K 5.5
GTEX-13O3P-0826-SM-5L3DH 5.2
GTEX-146FH-0826-SM-5SI8T 5.2
GTEX-11GS4-2126-SM-5A5KR 5.1
GTEX-R55F-1726-SM-2TF4R 5.1
GTEX-11P7K-0726-SM-5EGKX 5.0
GTEX-ZVTK-0326-SM-51MRR 5.0
GTEX-1399U-1826-SM-5PNZ1 4.7
GTEX-S4UY-0726-SM-4AD6X 4.7
GTEX-SIU7-1626-SM-4BRUK 4.7
GTEX-ZVE2-1226-SM-5NQ8R 4.7
GTEX-1211K-1926-SM-5EQLB 4.6
GTEX-T5JW-2026-SM-4DM63 4.6
GTEX-1122O-1226-SM-5H113 4.5
GTEX-13CF2-2026-SM-5K7VI 4.5
GTEX-R53T-1526-SM-48FEK 4.5
GTEX-UPK5-2326-SM-3P5Z8 4.4
GTEX-ZY6K-1626-SM-5GZWV 4.2
GTEX-11WQC-1726-SM-5GU4W 4.0
GTEX-ZTTD-1026-SM-51MRD 3.6
GTEX-XYKS-1326-SM-4BRUN 3.5
GTEX-XMD2-0926-SM-4WWEF 3.4
GTEX-111YS-1926-SM-5GICC 3.3
GTEX-132Q8-1426-SM-5EGK7 3.3
GTEX-ZVT4-1026-SM-57WC4 3.3
GTEX-1313W-0826-SM-5EQ4T 3.2
GTEX-ZU9S-1926-SM-5NQBP 3.2
GTEX-T6MN-0726-SM-32PML 3.1
GTEX-VUSG-2226-SM-4KKZO 3.0
GTEX-1192X-2326-SM-5987X 2.9
GTEX-11I78-2226-SM-5PNYA 2.9
GTEX-Y111-2026-SM-4SOJA 2.9
GTEX-11EI6-0626-SM-5985T 2.8
GTEX-Y8LW-1626-SM-5IFHX 2.8
GTEX-1117F-2826-SM-5GZXL 2.7
GTEX-T5JC-2126-SM-32PMO 2.6
GTEX-13OW8-0226-SM-5K7UP 2.5
GTEX-XMD1-0826-SM-4AT52 2.5
GTEX-ZTX8-1226-SM-4YCE9 2.5
GTEX-ZV7C-1826-SM-5NQ83 2.5
GTEX-14ABY-2126-SM-5QGQZ 2.4
GTEX-Y114-2026-SM-4TT7L 2.4
GTEX-ZPIC-1126-SM-5BC7F 2.4
GTEX-145LT-0726-SM-5S2VM 2.2
GTEX-T2YK-2226-SM-32QPT 2.2
GTEX-WOFL-0826-SM-3MJG1 2.2
GTEX-ZEX8-2226-SM-57WC6 2.2
GTEX-QEG5-0726-SM-4R1JQ 2.1
GTEX-QEL4-2126-SM-447AE 2.1
GTEX-QVJO-1826-SM-447C9 2.0
GTEX-WYJK-1326-SM-3NB2T 2.0
GTEX-11DXW-0626-SM-5N9ER 1.9
GTEX-11TT1-2126-SM-5GU5Y 1.9
GTEX-12WSK-2226-SM-5GCO5 1.8
GTEX-ZV6S-1826-SM-5NQ8D 1.8
GTEX-XBED-1626-SM-47JYN 1.7
GTEX-ZYWO-2326-SM-5GZY4 1.6
GTEX-X261-0626-SM-3NMD9 1.5
GTEX-1314G-1226-SM-5BC6D 1.4
GTEX-145MO-0826-SM-5NQBL 1.2
GTEX-YB5K-1626-SM-5IFIN 1.2
GTEX-11LCK-2426-SM-5HL5F 1.1
GTEX-139TU-0626-SM-5KM3X 1.0
GTEX-S33H-0326-SM-4AD6N 0.8
GTEX-Y3I4-1526-SM-4TT7K 0.8
GTEX-11NSD-0926-SM-5N9DR 0.7
GTEX-ZDXO-0126-SM-5S2ND 0.7
GTEX-12WSN-1326-SM-5GCNT 0.6
GTEX-U412-1826-SM-4DXTJ 0.4
GTEX-XV7Q-2326-SM-4BRVZ 0.4
GTEX-11GSO-1926-SM-5A5K3 0.2
GTEX-11O72-2126-SM-5N9FO 0.2
GTEX-11ONC-2126-SM-5HL6E 0.2
GTEX-13O3Q-2226-SM-5KM4O 0.2
GTEX-144GL-2026-SM-5LU3O 0.2
GTEX-X4XY-0926-SM-4E3JD 0.2
GTEX-YJ8O-2226-SM-5IFHW 0.2
GTEX-ZYW4-0826-SM-5GIDG 0.2
GTEX-117XS-1926-SM-5GICO 0.1
GTEX-11DXZ-1926-SM-5GZZL 0.1
GTEX-11EQ9-1826-SM-5Q5AJ 0.1
GTEX-11ZUS-0826-SM-5FQUY 0.1
GTEX-12BJ1-1826-SM-5HL9N 0.1
GTEX-132AR-0826-SM-5EGK6 0.1
GTEX-132NY-0826-SM-5K7Y7 0.1
GTEX-13FTW-1426-SM-5LZWZ 0.1
GTEX-13W46-0826-SM-5LU3H 0.1
GTEX-145ME-1526-SM-5Q5F2 0.1
GTEX-14753-2426-SM-5LU8U 0.1
GTEX-14E6E-1326-SM-5S2NR 0.1
GTEX-QMRM-1626-SM-4R1KV 0.1
GTEX-S32W-2026-SM-4AD6E 0.1
GTEX-TKQ1-0226-SM-33HB5 0.1
GTEX-TKQ2-1826-SM-33HB2 0.1
GTEX-WFON-1826-SM-3GILG 0.1
GTEX-WY7C-2726-SM-3NB3P 0.1
GTEX-XMK1-1126-SM-4IHJ8 0.1
GTEX-XQ3S-1326-SM-4BOPQ 0.1
GTEX-Y5V6-2126-SM-4WWFX 0.1
GTEX-YB5E-1726-SM-5IFJ3 0.1
GTEX-ZUA1-1526-SM-59HLS 0.1
GTEX-ZWKS-2826-SM-5NQ74 0.1
GTEX-117YX-1426-SM-5H12H 0.0
GTEX-11DXY-2326-SM-5GICW 0.0
GTEX-11DZ1-0326-SM-5N9BN 0.0
GTEX-11NV4-2026-SM-5N9DG 0.0
GTEX-11OF3-1926-SM-59889 0.0
GTEX-11P82-1326-SM-5HL62 0.0
GTEX-11TUW-1826-SM-5BC5D 0.0
GTEX-11WQK-2426-SM-5GU5C 0.0
GTEX-11ZTT-2326-SM-5EQLG 0.0
GTEX-12KS4-0126-SM-5Q5A5 0.0
GTEX-12WSB-0626-SM-59HJO 0.0
GTEX-12WSM-1726-SM-5BC6J 0.0
GTEX-139T6-1626-SM-5PNYZ 0.0
GTEX-13CF3-2126-SM-5IFJP 0.0
GTEX-13FTX-1126-SM-5N9EN 0.0
GTEX-13N1W-0626-SM-5MR4U 0.0
GTEX-13O61-1826-SM-5KM4I 0.0
GTEX-13PVQ-1026-SM-5KM3M 0.0
GTEX-13S86-1226-SM-5S2OA 0.0
GTEX-144GM-0926-SM-5O994 0.0
GTEX-145MN-1926-SM-5SIAI 0.0
GTEX-PSDG-1626-SM-48TCQ 0.0
GTEX-R55D-0826-SM-48FEA 0.0
GTEX-REY6-2426-SM-48FF5 0.0
GTEX-RUSQ-2026-SM-4GIAK 0.0
GTEX-S4Q7-1126-SM-4AD6R 0.0
GTEX-S7SE-0826-SM-4AT4D 0.0
GTEX-U8XE-0826-SM-4E3J1 0.0
GTEX-UTHO-1026-SM-3GAF7 0.0
GTEX-XGQ4-0926-SM-4AT4U 0.0
GTEX-XQ8I-2426-SM-4WAXY 0.0
GTEX-Y8E4-1626-SM-5S2MW 0.0
GTEX-Y9LG-1426-SM-5IFJZ 0.0
GTEX-YEC3-1026-SM-5IFI5 0.0
GTEX-YFCO-1826-SM-4W1YH 0.0
GTEX-ZA64-1526-SM-5CVMD 0.0
GTEX-ZAB4-2526-SM-5HL8M 0.0
GTEX-ZDTT-2126-SM-5S2OJ 0.0
GTEX-ZDYS-1126-SM-5K7UB 0.0
GTEX-ZLFU-2126-SM-4WWEV 0.0
GTEX-ZQG8-0726-SM-5P9H9 0.0
GTEX-ZQUD-1926-SM-51MSA 0.0
GTEX-ZT9W-2026-SM-51MRA 0.0
GTEX-ZYFC-0826-SM-5E44K 0.0
GTEX-ZYT6-0126-SM-5E45J 0.0
GTEX-ZZ64-1226-SM-5E43R 0.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

2.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 2.5
FF:10080-102A8 77 years, female 2.5

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