Fields »
ABOUT
HELP
BLOG
SDHA

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:74.5TPM
GTEx:42.6RPKM
FANTOM5:47.4Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 
 
 

Antibody staining

Antibody HPA041981

  

Antibody CAB034929

  

Adipocytes

 Not detected   Medium  

Chondrocytes

 Low  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Not detected  
      
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
Chondrocytes:Low
 
 
 

Antibody staining

Antibody HPA041981

  

Antibody CAB034929

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Not detected  

Chondrocytes

 Medium  
      
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

74.5
N/A Female, age 80
Sample 1
TPM: 86.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 98.4
N/A Female, age 57
Sample 3
TPM: 92.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 47.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 47.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

42.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 44.7
Samples: 350

Max RPKM: 80.1
Min RPKM: 27.3
Std RPKM: 7.7
Median RPKM: 43.4
GTEX-ZP4G-2326-SM-57WEM 80.1
GTEX-145ME-1926-SM-5SI9S 73.9
GTEX-OHPN-0226-SM-48TBV 73.3
GTEX-YB5E-2126-SM-5IFI7 72.4
GTEX-ZVT2-2226-SM-5NQ6P 69.7
GTEX-XUZC-1826-SM-4BRVO 68.8
GTEX-Y5V6-2526-SM-5IFJV 66.7
GTEX-ZDTT-2626-SM-5S2OP 63.5
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 39.4
Samples: 227

Max RPKM: 76.4
Min RPKM: 17.2
Std RPKM: 10.9
Median RPKM: 37.2
GTEX-ZP4G-1326-SM-5EGIW 76.4
GTEX-ZF2S-1526-SM-5S2OO 72.6
GTEX-11EQ9-1126-SM-5987I 70.5
GTEX-XV7Q-1726-SM-4BRUU 68.1
GTEX-Y5LM-0826-SM-4VDSW 64.4
GTEX-13O21-3126-SM-5J1OI 63.5
GTEX-11I78-0226-SM-5HL6R 63.1
GTEX-12C56-0826-SM-5EGJ5 63.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

47.4

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 47.4
FF:10010-101C1 65,65,76 years, mixed 47.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.