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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:87.0TPM
GTEx:49.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Low
Neuropil:Medium
 

Antibody staining

Antibody HPA041981

 

Antibody CAB034929

 

Endothelial cells

Low   Low  

Glial cells

Low   Not detected  

Neuronal cells

Low   Low  

Neuropil

Medium   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

87.0

N/A Male, age 5
Sample 1
TPM: 102.8
overview Female, age 40
Sample 2
TPM: 76.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 82.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

49.9

GTEx sample id

RPKM

43.049.556.826.474.3010203040506070
 
43.049.556.826.474.3010203040506070

Brain - Cortex

Brain - Cortex
RPKM: 49.2
Samples: 114

Max RPKM: 74.3
Min RPKM: 26.4
Std RPKM: 9.6
Median RPKM: 49.4
GTEX-14BMV-3026-SM-5S2PQ 74.3
GTEX-13FHO-3026-SM-5J1O9 67.0
GTEX-13NYS-3126-SM-5KLYV 65.5
GTEX-1313W-3126-SM-5LZUI 64.8
GTEX-13OW6-3026-SM-5J2MI 63.8
GTEX-12ZZX-2926-SM-5GCOQ 63.7
GTEX-11GSO-2926-SM-5HL73 62.6
GTEX-14ASI-3026-SM-5S2PN 62.0
GTEX-12ZZY-3026-SM-5GCOU 61.8
GTEX-11OC5-0726-SM-5P9JK 61.1
GTEX-13OW8-2826-SM-5L3GC 61.1
GTEX-13O3O-3126-SM-5KM3H 61.0
GTEX-11DXY-3226-SM-5GIDE 60.1
GTEX-132Q8-3026-SM-5PNVG 60.0
GTEX-T6MN-2626-SM-32PMQ 60.0
GTEX-13FXS-3126-SM-5J2NN 59.7
GTEX-1192X-3126-SM-5N9BY 59.6
GTEX-WL46-2926-SM-3LK82 59.3
GTEX-13NYC-2826-SM-5K7WR 59.1
GTEX-117XS-3026-SM-5N9CA 58.9
GTEX-T5JC-2426-SM-3NMDB 58.7
GTEX-145MH-3026-SM-5Q5DZ 58.6
GTEX-QVJO-1426-SM-2S1QY 58.5
GTEX-ZYFD-3026-SM-5E44C 58.2
GTEX-XLM4-3026-SM-4AT6L 58.0
GTEX-TSE9-3026-SM-3DB76 57.4
GTEX-11NUK-2926-SM-5A5MD 57.1
GTEX-13OVH-3026-SM-5MR4N 57.1
GTEX-1399T-3026-SM-5KLZC 56.9
GTEX-131YS-3126-SM-5KLYT 56.3
GTEX-ZAK1-3026-SM-5S2MJ 56.1
GTEX-145MF-2726-SM-5O995 55.8
GTEX-12WSC-3026-SM-5GCNF 55.7
GTEX-13VXU-2926-SM-5LU5C 55.7
GTEX-QVUS-2826-SM-3GADB 55.2
GTEX-YFC4-3126-SM-5PNV6 54.7
GTEX-WVLH-3026-SM-3MJG9 54.0
GTEX-11GS4-3126-SM-5A5LH 53.9
GTEX-111FC-3126-SM-5GZZ2 53.7
GTEX-12ZZW-2926-SM-5LZUP 53.7
GTEX-11OF3-2926-SM-5HL78 53.4
GTEX-11ZUS-2926-SM-5FQSL 53.2
GTEX-WWYW-3126-SM-3NB39 53.2
GTEX-WZTO-2926-SM-3NM9I 53.0
GTEX-RNOR-2326-SM-2TF4I 52.9
GTEX-145LS-3126-SM-5Q5BY 52.4
GTEX-Y8DK-0826-SM-4TT3T 52.4
GTEX-13O3Q-2926-SM-5KM45 51.8
GTEX-144GL-3026-SM-5Q5CW 51.8
GTEX-QMR6-1426-SM-32PLA 51.5
GTEX-Y111-2726-SM-4TT3N 51.4
GTEX-NPJ8-1526-SM-2D7VU 51.3
GTEX-11ONC-2926-SM-5P9JM 51.0
GTEX-11DXW-1126-SM-5H12Q 50.5
GTEX-YJ89-3026-SM-5IFJI 50.2
GTEX-11EMC-3226-SM-5EGKW 49.8
GTEX-1128S-2726-SM-5H12C 49.5
GTEX-13OVJ-2826-SM-5L3GW 49.4
GTEX-13NYB-3026-SM-5IJD7 49.2
GTEX-XOTO-3026-SM-4B65M 49.2
GTEX-PVOW-2526-SM-2XCF7 49.0
GTEX-ZUA1-3026-SM-59HJC 49.0
GTEX-ZVT3-3026-SM-5E43N 48.7
GTEX-X4XX-3026-SM-3NMB2 48.5
GTEX-WHSE-3026-SM-3P5ZH 48.4
GTEX-13G51-3026-SM-5IJB8 48.3
GTEX-12126-1026-SM-5P9JJ 48.1
GTEX-X585-3026-SM-46MWF 47.8
GTEX-11WQK-3026-SM-5EQL6 47.7
GTEX-13SLX-3126-SM-5S2Q5 47.5
GTEX-ZE7O-3126-SM-5HL5X 47.3
GTEX-UTHO-3026-SM-3GAFB 46.9
GTEX-T2IS-3026-SM-32QPM 46.6
GTEX-Q2AG-2926-SM-2HMJ3 45.9
GTEX-11TTK-2926-SM-5PNYP 45.3
GTEX-13JVG-3126-SM-5L3FH 45.3
GTEX-QDT8-2926-SM-32PKC 45.0
GTEX-N7MT-1126-SM-5SI7V 44.9
GTEX-131XW-3126-SM-5LZUC 44.7
GTEX-14A5I-2926-SM-5Q5CQ 44.6
GTEX-OXRN-2426-SM-2I5EQ 44.6
GTEX-R55F-1326-SM-5S2V4 44.3
GTEX-11PRG-2926-SM-5987A 44.2
GTEX-Z93S-2926-SM-57WB9 44.0
GTEX-139T8-1026-SM-5J2MC 43.1
GTEX-13FLW-1426-SM-5K7YE 42.9
GTEX-13QIC-2926-SM-5J2NF 42.3
GTEX-12ZZZ-3026-SM-5BC67 41.8
GTEX-RU72-3026-SM-5SI7Y 41.8
GTEX-13X6K-2926-SM-5Q5D5 41.2
GTEX-13X6J-3026-SM-5Q5CU 40.8
GTEX-11O72-2926-SM-5BC4V 39.7
GTEX-13FHP-3026-SM-5IJBS 39.4
GTEX-13S7M-3126-SM-5RQJQ 39.1
GTEX-11EI6-3026-SM-5GZZO 38.7
GTEX-12WSH-3026-SM-5CVNI 38.3
GTEX-13JUV-2926-SM-5LZX7 38.3
GTEX-144FL-3026-SM-5O99C 38.1
GTEX-NPJ7-2726-SM-2I3FT 38.0
GTEX-ZZPT-3026-SM-5GZXH 37.9
GTEX-13PL6-3126-SM-5LUAR 37.5
GTEX-12WSD-3126-SM-5HL7P 37.2
GTEX-13OW7-3026-SM-5L3GY 37.0
GTEX-13PVQ-3026-SM-5SI93 37.0
GTEX-11GSP-3226-SM-5986O 36.9
GTEX-145MG-3026-SM-5RQJA 35.6
GTEX-PWO3-0926-SM-2I5EY 35.5
GTEX-1445S-3026-SM-5O9BR 33.4
GTEX-147GR-3026-SM-5S2ML 30.1
GTEX-11NV4-2126-SM-5N9DS 28.9
GTEX-ZAJG-3126-SM-5HL9J 28.7
GTEX-12WSA-2926-SM-5EQ4D 27.7
GTEX-13IVO-2926-SM-5L3CZ 26.5
GTEX-1117F-3226-SM-5N9CT 26.4
Show all
40.751.859.016.882.701020304050607080
 
40.751.859.016.882.701020304050607080

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 50.6
Samples: 108

Max RPKM: 82.7
Min RPKM: 16.8
Std RPKM: 13.3
Median RPKM: 51.8
GTEX-13NYS-0011-R10a-SM-5MR4S 82.7
GTEX-13RTJ-0011-R10b-SM-5O9CW 80.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 75.9
GTEX-X4EP-0011-R10B-SM-4QASJ 73.9
GTEX-13FHO-0011-R10b-SM-5J2MM 72.9
GTEX-13X6K-0011-R10a-SM-5P9JR 72.3
GTEX-T6MN-0011-R10A-SM-32QP7 71.2
GTEX-1313W-0011-R10b-SM-5DUXA 70.3
GTEX-XLM4-0011-R10A-SM-4AT5P 68.1
GTEX-12WSF-0011-R10a-SM-5LZVH 68.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 66.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 66.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 66.8
GTEX-131YS-0011-R10b-SM-5EQ5N 66.5
GTEX-13CZV-0011-R10b-SM-5LZYD 66.1
GTEX-T5JC-0011-R10A-SM-32PM2 65.4
GTEX-145MH-0011-R10b-SM-5PNUK 64.1
GTEX-12WSC-0011-R10a-SM-5GU57 63.9
GTEX-S7SE-0011-R10A-SM-2XCDF 63.6
GTEX-Y8DK-0011-R10A-SM-4SOK1 61.8
GTEX-13O3O-0011-R10a-SM-5LUA9 61.5
GTEX-WL46-0011-R10A-SM-3MJFQ 61.2
GTEX-13OW7-0011-R10a-SM-5L3H3 61.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60.2
GTEX-13FXS-0011-R10a-SM-5J2MA 60.0
GTEX-13O3Q-0011-R10b-SM-5KM39 59.7
GTEX-11H98-0011-R10b-SM-5NQ98 59.5
GTEX-YFC4-0011-R10a-SM-4SOK5 58.9
GTEX-Q2AG-0011-R10A-SM-2HMLA 58.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 58.4
GTEX-NL3H-0011-R10A-SM-2I3E9 58.3
GTEX-13S7M-0011-R10b-SM-5PNZB 57.8
GTEX-N7MT-0011-R10A-SM-2I3E1 57.8
GTEX-ZF28-0011-R10a-SM-4WWEH 57.6
GTEX-14BIL-0011-R10a-SM-5SI75 57.3
GTEX-X585-0011-R10A-SM-46MUY 57.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 56.9
GTEX-WZTO-0011-R10B-SM-4E3KB 56.6
GTEX-12WSM-0011-R10a-SM-5DUWV 56.0
GTEX-13NYB-0011-R10a-SM-5KM43 56.0
GTEX-13X6J-0011-R10b-SM-5PNWA 55.8
GTEX-13N1W-0011-R10b-SM-5MR4H 55.7
GTEX-147GR-0011-R10b-SM-5S2UM 55.4
GTEX-X4XX-0011-R10B-SM-46MWO 55.4
GTEX-13OW8-0011-R10a-SM-5L3H6 55.2
GTEX-14BIN-0011-R10a-SM-5S2UA 55.1
GTEX-13OVL-0011-R10a-SM-5L3GS 54.7
GTEX-NPJ8-0011-R10A-SM-2YUMO 54.5
GTEX-131XH-0011-R10a-SM-5EGLJ 54.2
GTEX-12WSE-0011-R10b-SM-5P9JV 53.8
GTEX-WWYW-0011-R10A-SM-3NB35 53.7
GTEX-WVLH-0011-R10A-SM-3MJFM 53.6
GTEX-N7MS-0011-R10A-SM-2HMJK 52.1
GTEX-145LS-0011-R10a-SM-5PNUQ 52.0
GTEX-13X6I-0011-R10a-SM-5PNWI 51.5
GTEX-13OW6-0011-R10a-SM-5L3HE 50.8
GTEX-13QIC-0011-R10a-SM-5O9C7 49.9
GTEX-YJ89-0011-R10a-SM-4SOK9 49.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 49.6
GTEX-13JUV-0011-R10b-SM-5LZXR 49.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 49.3
GTEX-13SLX-0011-R10a-SM-5P9HV 49.0
GTEX-13G51-0011-R10b-SM-5LZYF 48.9
GTEX-QVUS-0011-R10A-SM-3GIK3 48.7
GTEX-147F4-0011-R10b-SM-5S2WC 48.5
GTEX-QDT8-0011-R10A-SM-32PKG 47.6
GTEX-145MG-0011-R10a-SM-5PNWG 47.5
GTEX-QMR6-0011-R10A-SM-32PKO 47.2
GTEX-145LU-0011-R10a-SM-5PNWJ 47.0
GTEX-NPJ7-0011-R10A-SM-2I3E5 46.9
GTEX-TSE9-0011-R10A-SM-3DB7O 46.8
GTEX-ZUA1-0011-R10a-SM-51MT6 45.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 45.2
GTEX-RVPU-0011-R10A-SM-2XCAH 44.8
GTEX-12WSH-0011-R10a-SM-5LZUS 43.5
GTEX-13QJC-0011-R10a-SM-5SI63 43.5
GTEX-13FLW-0011-R10b-SM-5LZZF 42.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 42.3
GTEX-P44H-0011-R10A-SM-2XCEK 42.3
GTEX-13FLV-0011-R10b-SM-5LZZ2 41.4
GTEX-13SLW-0011-R10a-SM-5S2UI 40.9
GTEX-ZVT3-0011-R10b-SM-57WB6 40.2
GTEX-11WQK-0011-R10a-SM-5BC6R 40.1
GTEX-11WQC-0011-R10a-SM-57WCT 39.2
GTEX-12126-0011-R10b-SM-5BC6T 38.6
GTEX-1445S-0011-R10a-SM-5PNWB 38.6
GTEX-OXRN-0011-R10A-SM-2I5GC 38.3
GTEX-13JVG-0011-R10b-SM-5KM2P 37.5
GTEX-XMD1-0011-R10A-SM-4AT4A 36.4
GTEX-12WSD-0011-R10b-SM-5GU79 36.2
GTEX-Z93S-0011-R10a-SM-4RGNM 36.2
GTEX-13FTZ-0011-R10b-SM-5KLZS 35.9
GTEX-11GSP-0011-R10a-SM-5NQ7J 35.6
GTEX-139TS-0011-R10a-SM-5K7TU 34.4
GTEX-11ZUS-0011-R10b-SM-5BC79 34.2
GTEX-14753-0011-R10b-SM-5S2WE 32.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 32.0
GTEX-1477Z-0011-R10b-SM-5S2RF 31.6
GTEX-12WSA-0011-R10b-SM-5P9ET 30.8
GTEX-X261-0011-R10B-SM-4E3JT 30.8
GTEX-NL4W-0011-R10A-SM-2I3DY 30.4
GTEX-131XW-0011-R10a-SM-5DUVA 29.7
GTEX-ZV68-0011-R10a-SM-51MT7 29.2
GTEX-13N2G-0011-R10a-SM-5MR34 29.1
GTEX-ZXG5-0011-R10a-SM-57WDD 27.6
GTEX-13NZA-0011-R10b-SM-5KM54 24.6
GTEX-OXRO-0011-R10A-SM-2I5EH 21.9
GTEX-13IVO-0011-R10a-SM-5LZY3 16.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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