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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:141.6TPM
GTEx:72.5RPKM
FANTOM5:189.5Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA041981

 

Antibody CAB034929

 

Glandular cells

High   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

141.6

overview Male, age 65
Sample 1
TPM: 161.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 128.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 110.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 166.4

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

72.5

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 72.5
Samples: 88

Max RPKM: 116.4
Min RPKM: 28.3
Std RPKM: 22.5
Median RPKM: 71.2
GTEX-ZXES-1526-SM-5NQ95 116.4
GTEX-11EQ9-1326-SM-5985X 114.2
GTEX-ZYFG-2026-SM-5E43Y 112.2
GTEX-YB5E-1526-SM-5IFIE 111.5
GTEX-111YS-1426-SM-5GID8 105.8
GTEX-ZZ64-0526-SM-5GZXM 105.8
GTEX-ZTX8-0526-SM-59HLD 105.7
GTEX-XUZC-1426-SM-4BRV3 104.6
GTEX-13113-1226-SM-5EGHT 102.7
GTEX-ZLV1-1126-SM-4WWBW 102.5
GTEX-131XF-1326-SM-5GCMQ 101.5
GTEX-XGQ4-1326-SM-4GIDU 101.3
GTEX-ZPCL-1726-SM-57WEO 99.7
GTEX-1122O-1326-SM-5H11F 99.0
GTEX-11DXX-1626-SM-5H11H 98.2
GTEX-ZVZP-1826-SM-5GZXB 97.2
GTEX-XBED-1426-SM-4AT4G 96.8
GTEX-145LT-1026-SM-5LU9O 96.3
GTEX-Y9LG-1626-SM-5IFHM 95.4
GTEX-139YR-2226-SM-5IFFW 95.1
GTEX-13D11-0726-SM-5LZZB 94.9
GTEX-13FTW-2026-SM-5IJE2 93.2
GTEX-11I78-1126-SM-5A5K5 93.0
GTEX-YEC4-1726-SM-4W21E 92.4
GTEX-13PL7-2626-SM-5IFH4 91.8
GTEX-14DAR-1426-SM-5RQIR 89.7
GTEX-YF7O-1826-SM-5IFIU 86.4
GTEX-ZTSS-0926-SM-59865 85.9
GTEX-Y5LM-1626-SM-4VDTB 83.0
GTEX-VJYA-0926-SM-4KL1N 82.9
GTEX-ZYWO-1526-SM-5SIAL 82.8
GTEX-ZA64-1226-SM-5HL7B 82.6
GTEX-133LE-1426-SM-5IFH1 80.6
GTEX-ZEX8-1826-SM-57WBH 79.7
GTEX-14E6E-1626-SM-5RQI7 79.5
GTEX-XXEK-1026-SM-4BRUW 77.9
GTEX-X5EB-1626-SM-4E3IV 77.2
GTEX-139T6-1026-SM-5IJGC 76.7
GTEX-1399S-2026-SM-5KM4B 76.6
GTEX-ZVT2-2126-SM-5NQ93 75.2
GTEX-WFJO-0926-SM-4LVM2 74.2
GTEX-ZTPG-2626-SM-57WFX 72.5
GTEX-11P7K-1626-SM-5GU63 72.3
GTEX-11DXZ-1326-SM-5H11X 72.3
GTEX-13O61-1326-SM-5KM31 70.0
GTEX-13RTK-0826-SM-5Q5C6 69.5
GTEX-11NSD-1726-SM-5N9C3 67.4
GTEX-WH7G-1626-SM-4LVMY 67.1
GTEX-1399R-2026-SM-5K7WN 66.4
GTEX-WFG8-1626-SM-4LVMB 66.3
GTEX-13CF3-1226-SM-5LZXN 66.1
GTEX-11P82-0826-SM-5P9GU 64.8
GTEX-XAJ8-0526-SM-47JYK 63.8
GTEX-Y114-1426-SM-4TT6W 63.8
GTEX-13FH7-1226-SM-5IJFK 63.5
GTEX-Y3IK-1726-SM-4YCCR 63.0
GTEX-ZP4G-1626-SM-57WGD 62.6
GTEX-WQUQ-2426-SM-4MVNW 60.6
GTEX-WFG7-1726-SM-4LVME 60.2
GTEX-1399U-2126-SM-5IFEZ 59.6
GTEX-ZLFU-1526-SM-4WWBT 58.8
GTEX-12BJ1-1926-SM-5HL9Z 58.3
GTEX-Z9EW-0926-SM-5CVMM 57.8
GTEX-131XG-1726-SM-5LZUR 57.6
GTEX-ZPIC-2326-SM-57WDW 57.0
GTEX-ZVP2-1726-SM-5GU5P 56.6
GTEX-WRHK-1026-SM-4MVOD 56.5
GTEX-11XUK-1426-SM-5EQMG 53.8
GTEX-13111-1426-SM-5DUW3 52.0
GTEX-13O21-1026-SM-5IJDU 51.9
GTEX-11VI4-1626-SM-5EQKO 50.4
GTEX-X15G-1426-SM-4PQZK 49.8
GTEX-13QBU-1926-SM-5IJEW 49.5
GTEX-ZF2S-1726-SM-57WFT 48.8
GTEX-12WSK-1526-SM-5CVNO 48.0
GTEX-ZQG8-2526-SM-57WEQ 46.3
GTEX-XMK1-1826-SM-4B66F 44.7
GTEX-13OVI-1926-SM-5IJCG 43.5
GTEX-ZQUD-0926-SM-57WE3 43.2
GTEX-117YX-0326-SM-5GICL 42.0
GTEX-111CU-1326-SM-5NQ8L 40.2
GTEX-145ME-0926-SM-5O9AR 39.3
GTEX-VUSG-1726-SM-4KKZL 36.5
GTEX-WEY5-1526-SM-4LMJF 35.6
GTEX-148VJ-2226-SM-5NQ9M 35.0
GTEX-UPK5-2026-SM-4JBIM 34.2
GTEX-1192X-2526-SM-59868 34.0
GTEX-ZC5H-2326-SM-4WAYT 28.3
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

189.5

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 189.5
FF:10024-101D6 15,40,85 years, mixed 189.5

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