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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:12.5RPKM
FANTOM5:80.1Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA031707

 

Antibody HPA031708

 

Antibody HPA032045

 

Antibody CAB017840

 

Glial cells

Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Low   Medium   Not detected  
       
       
       

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

12.5

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 12.5
Samples: 94

Max RPKM: 24.1
Min RPKM: 5
Std RPKM: 3.6
Median RPKM: 12.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 24.1
GTEX-QVUS-0011-R1A-SM-3GAD2 23.6
GTEX-QVJO-0011-R1A-SM-2S1QI 19.4
GTEX-QMR6-0011-R1A-SM-32PKW 19.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 19.2
GTEX-13OW5-0011-R1b-SM-5L3GE 18.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 18.1
GTEX-13FHO-0011-R1b-SM-5KLZG 17.1
GTEX-ZAB4-0011-R1a-SM-4RGNO 16.8
GTEX-ZUA1-0011-R1a-SM-4YCE2 16.6
GTEX-11ZTS-0011-R1a-SM-5BC71 16.3
GTEX-QDT8-0011-R1A-SM-32PKS 15.9
GTEX-T6MN-0011-R1A-SM-32QOY 15.8
GTEX-PWO3-0011-R1A-SM-2I5EW 15.8
GTEX-144GL-0011-R1a-SM-5PNZ5 15.8
GTEX-13G51-0011-R1a-SM-5LZYR 15.5
GTEX-WZTO-0011-R1B-SM-3NMAR 15.4
GTEX-1313W-0011-R1b-SM-5EQ4A 15.1
GTEX-12WSH-0011-R1a-SM-5GU5V 15.0
GTEX-13OVL-0011-R1a-SM-5L3H5 15.0
GTEX-UTHO-0011-R1A-SM-3GIJO 14.9
GTEX-X585-0011-R1B-SM-46MVE 14.9
GTEX-11GSO-0011-R1b-SM-57WD3 14.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 14.5
GTEX-13N2G-0011-R1b-SM-5MR3G 14.5
GTEX-13NYS-0011-R1b-SM-5MR55 14.5
GTEX-XMD1-0011-R1A-SM-4AT4C 14.3
GTEX-WL46-0011-R1A-SM-3LK6M 14.3
GTEX-XOTO-0011-R1B-SM-4B65C 14.2
GTEX-R55E-0011-R1A-SM-2TC6N 14.2
GTEX-13N1W-0011-R1b-SM-5MR4T 14.2
GTEX-145LS-0011-R1b-SM-5PNUP 14.0
GTEX-13OW6-0011-R1a-SM-5L3HQ 13.8
GTEX-PVOW-0011-R1A-SM-32PL6 13.7
GTEX-WWYW-0011-R1A-SM-3TW8G 13.6
GTEX-13JVG-0011-R1a-SM-5KM32 13.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 13.2
GTEX-P44H-0011-R1A-SM-3NM8J 13.2
GTEX-13OW8-0011-R1a-SM-5L3HI 13.2
GTEX-131XH-0011-R1a-SM-5DUWA 13.1
GTEX-X4XX-0011-R1B-SM-3P622 13.0
GTEX-12WSD-0011-R1b-SM-5LZVY 12.9
GTEX-131YS-0011-R1a-SM-5DUXC 12.9
GTEX-1212Z-0011-R1b-SM-5BC72 12.9
GTEX-13JUV-0011-R1a-SM-5LZY4 12.9
GTEX-13FLW-0011-R1b-SM-5LZX2 12.7
GTEX-11UD1-0011-R1b-SM-5BC7D 12.4
GTEX-12WSF-0011-R1a-SM-5DUVI 12.3
GTEX-145MH-0011-R1b-SM-5PNWY 12.3
GTEX-1399T-0011-R1b-SM-5DUWN 12.2
GTEX-13FXS-0011-R1a-SM-5K7U6 12.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 12.0
GTEX-13QJC-0011-R1b-SM-5S2UU 11.9
GTEX-T5JC-0011-R1A-SM-32PM6 11.9
GTEX-N7MT-0011-R1a-SM-5SI7S 11.9
GTEX-13NYB-0011-R1b-SM-5KM4F 11.8
GTEX-RNOR-0011-R1A-SM-5SI8F 11.6
GTEX-N7MS-0011-R1a-SM-2HMJG 11.6
GTEX-NPJ8-0011-R1a-SM-33HCB 11.6
GTEX-132Q8-0011-R1a-SM-5EGLK 11.4
GTEX-13X6I-0011-R1b-SM-5PNZC 11.4
GTEX-145LU-0011-R1a-SM-5Q5CE 11.2
GTEX-14ASI-0011-R1b-SM-5S2TY 11.2
GTEX-13S7M-0011-R1b-SM-5PNZE 11.1
GTEX-S7SE-0011-R1A-SM-2XCDE 11.1
GTEX-12WSE-0011-R1b-SM-5GU4V 11.0
GTEX-YFC4-0011-R1a-SM-4V6EH 11.0
GTEX-TSE9-0011-R1A-SM-3DB7E 10.9
GTEX-13O3O-0011-R1b-SM-5KM2K 10.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 10.3
GTEX-NPJ7-0011-R1a-SM-3GACT 10.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 10.1
GTEX-13NZA-0011-R1b-SM-5LUAF 10.0
GTEX-12WSB-0011-R1b-SM-5P9EY 9.8
GTEX-139TT-0011-R1a-SM-5LZVD 9.7
GTEX-WVLH-0011-R1A-SM-4MVOK 9.7
GTEX-12WSM-0011-R1a-SM-5LZW6 9.6
GTEX-13SLW-0011-R1a-SM-5S2W7 9.6
GTEX-13OW7-0011-R1b-SM-5L3HF 9.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 8.7
GTEX-ZVZQ-0011-R1a-SM-57WBU 8.6
GTEX-13FHP-0011-R1b-SM-5K7XL 8.4
GTEX-13112-0011-R1b-SM-5HL7K 8.2
GTEX-11ONC-0011-R1a-SM-57WD4 8.2
GTEX-YJ89-0011-R1a-SM-4RGLS 7.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 7.4
GTEX-NL3H-0011-R1a-SM-48TDJ 6.6
GTEX-13CF2-0011-R1a-SM-5LZY1 6.6
GTEX-139T8-0011-R1a-SM-5HL75 6.6
GTEX-144GO-0011-R1a-SM-5PNWO 6.2
GTEX-ZE7O-0011-R1a-SM-57WDM 6.2
GTEX-ZF28-0011-R1a-SM-4WWD1 6.1
GTEX-13PDP-0011-R1a-SM-5PNX5 6.0
GTEX-13FTY-0011-R1a-SM-5LZXE 5.0
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

80.1

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 80.1
FF:10153-102I9 76 years, female 100.6
FF:10169-103B7 60 years, female 75.7
FF:10374-105G5 89 years, female 64.2

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by the Knut & Alice Wallenberg foundation.